Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a20aQ8VDB9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a20aQ8VDB9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.36■□□□□ 0.53
Slc6a20aQ8VDB9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a20aQ8VDB9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a20aQ8VDB9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a20aQ8VDB9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Slc6a20aQ8VDB9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a20aQ8VDB9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a20aQ8VDB9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Slc6a20aQ8VDB9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.35■□□□□ 0.53
Slc6a20aQ8VDB9 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.35■□□□□ 0.53
Slc6a20aQ8VDB9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
Slc6a20aQ8VDB9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a20aQ8VDB9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a20aQ8VDB9 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.35■□□□□ 0.53
Slc6a20aQ8VDB9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Slc6a20aQ8VDB9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a20aQ8VDB9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Slc6a20aQ8VDB9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a20aQ8VDB9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a20aQ8VDB9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a20aQ8VDB9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Slc6a20aQ8VDB9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a20aQ8VDB9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.35■□□□□ 0.53
Slc6a20aQ8VDB9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a20aQ8VDB9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a20aQ8VDB9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a20aQ8VDB9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a20aQ8VDB9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a20aQ8VDB9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Slc6a20aQ8VDB9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a20aQ8VDB9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a20aQ8VDB9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a20aQ8VDB9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc6a20aQ8VDB9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc6a20aQ8VDB9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Slc6a20aQ8VDB9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.33■□□□□ 0.53
Slc6a20aQ8VDB9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Slc6a20aQ8VDB9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.33■□□□□ 0.52
Slc6a20aQ8VDB9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a20aQ8VDB9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Slc6a20aQ8VDB9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a20aQ8VDB9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.33■□□□□ 0.52
Slc6a20aQ8VDB9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a20aQ8VDB9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a20aQ8VDB9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Slc6a20aQ8VDB9 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.32■□□□□ 0.52
Slc6a20aQ8VDB9 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.32■□□□□ 0.52
Slc6a20aQ8VDB9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.32■□□□□ 0.52
Slc6a20aQ8VDB9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a20aQ8VDB9 Gm13234-201ENSMUST00000120010 747 ntBASIC18.32■□□□□ 0.52
Slc6a20aQ8VDB9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.32■□□□□ 0.52
Slc6a20aQ8VDB9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.32■□□□□ 0.52
Slc6a20aQ8VDB9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a20aQ8VDB9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Slc6a20aQ8VDB9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a20aQ8VDB9 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.32■□□□□ 0.52
Slc6a20aQ8VDB9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a20aQ8VDB9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a20aQ8VDB9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Slc6a20aQ8VDB9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a20aQ8VDB9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a20aQ8VDB9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a20aQ8VDB9 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.31■□□□□ 0.52
Slc6a20aQ8VDB9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.31■□□□□ 0.52
Slc6a20aQ8VDB9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a20aQ8VDB9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a20aQ8VDB9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a20aQ8VDB9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a20aQ8VDB9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a20aQ8VDB9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Slc6a20aQ8VDB9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.3■□□□□ 0.52
Slc6a20aQ8VDB9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a20aQ8VDB9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a20aQ8VDB9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Slc6a20aQ8VDB9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a20aQ8VDB9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Slc6a20aQ8VDB9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a20aQ8VDB9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a20aQ8VDB9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a20aQ8VDB9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.3■□□□□ 0.52
Slc6a20aQ8VDB9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a20aQ8VDB9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Slc6a20aQ8VDB9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a20aQ8VDB9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a20aQ8VDB9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a20aQ8VDB9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Slc6a20aQ8VDB9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a20aQ8VDB9 Gm13534-201ENSMUST00000121169 513 ntBASIC18.29■□□□□ 0.52
Slc6a20aQ8VDB9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Slc6a20aQ8VDB9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a20aQ8VDB9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a20aQ8VDB9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.29■□□□□ 0.52
Slc6a20aQ8VDB9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a20aQ8VDB9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Slc6a20aQ8VDB9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a20aQ8VDB9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a20aQ8VDB9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Slc6a20aQ8VDB9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms