Protein–RNA interactions for Protein: Q8VCS3

Fam20b, Glycosaminoglycan xylosylkinase, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam20bQ8VCS3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Fam20bQ8VCS3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam20bQ8VCS3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Fam20bQ8VCS3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam20bQ8VCS3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam20bQ8VCS3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam20bQ8VCS3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.29■□□□□ 0.36
Fam20bQ8VCS3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam20bQ8VCS3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Fam20bQ8VCS3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam20bQ8VCS3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Fam20bQ8VCS3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam20bQ8VCS3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam20bQ8VCS3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam20bQ8VCS3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Fam20bQ8VCS3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam20bQ8VCS3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam20bQ8VCS3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Fam20bQ8VCS3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.29■□□□□ 0.36
Fam20bQ8VCS3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam20bQ8VCS3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam20bQ8VCS3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam20bQ8VCS3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam20bQ8VCS3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Fam20bQ8VCS3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam20bQ8VCS3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam20bQ8VCS3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Fam20bQ8VCS3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam20bQ8VCS3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam20bQ8VCS3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam20bQ8VCS3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Fam20bQ8VCS3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.28■□□□□ 0.36
Fam20bQ8VCS3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.28■□□□□ 0.36
Fam20bQ8VCS3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam20bQ8VCS3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Fam20bQ8VCS3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam20bQ8VCS3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam20bQ8VCS3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam20bQ8VCS3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fam20bQ8VCS3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Fam20bQ8VCS3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fam20bQ8VCS3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.27■□□□□ 0.36
Fam20bQ8VCS3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Fam20bQ8VCS3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Fam20bQ8VCS3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.27■□□□□ 0.36
Fam20bQ8VCS3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Fam20bQ8VCS3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Fam20bQ8VCS3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Fam20bQ8VCS3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fam20bQ8VCS3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Fam20bQ8VCS3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Fam20bQ8VCS3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Fam20bQ8VCS3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Fam20bQ8VCS3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Fam20bQ8VCS3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Fam20bQ8VCS3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.26■□□□□ 0.35
Fam20bQ8VCS3 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.26■□□□□ 0.35
Fam20bQ8VCS3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fam20bQ8VCS3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Fam20bQ8VCS3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.26■□□□□ 0.35
Fam20bQ8VCS3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fam20bQ8VCS3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fam20bQ8VCS3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fam20bQ8VCS3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Fam20bQ8VCS3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Fam20bQ8VCS3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Fam20bQ8VCS3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Fam20bQ8VCS3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Fam20bQ8VCS3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fam20bQ8VCS3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Fam20bQ8VCS3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Fam20bQ8VCS3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fam20bQ8VCS3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fam20bQ8VCS3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fam20bQ8VCS3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.25■□□□□ 0.35
Fam20bQ8VCS3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Fam20bQ8VCS3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fam20bQ8VCS3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fam20bQ8VCS3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
Fam20bQ8VCS3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Fam20bQ8VCS3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Fam20bQ8VCS3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fam20bQ8VCS3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fam20bQ8VCS3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fam20bQ8VCS3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.24■□□□□ 0.35
Fam20bQ8VCS3 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.24■□□□□ 0.35
Fam20bQ8VCS3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Fam20bQ8VCS3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fam20bQ8VCS3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Fam20bQ8VCS3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Fam20bQ8VCS3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fam20bQ8VCS3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fam20bQ8VCS3 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.24■□□□□ 0.35
Fam20bQ8VCS3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fam20bQ8VCS3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fam20bQ8VCS3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fam20bQ8VCS3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Fam20bQ8VCS3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
Fam20bQ8VCS3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.24■□□□□ 0.35
Fam20bQ8VCS3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms