Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trnt1Q8K1J6 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.02■□□□□ 0.48
Trnt1Q8K1J6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.02■□□□□ 0.48
Trnt1Q8K1J6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trnt1Q8K1J6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Trnt1Q8K1J6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trnt1Q8K1J6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trnt1Q8K1J6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trnt1Q8K1J6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
Trnt1Q8K1J6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Trnt1Q8K1J6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trnt1Q8K1J6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.01■□□□□ 0.47
Trnt1Q8K1J6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trnt1Q8K1J6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trnt1Q8K1J6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trnt1Q8K1J6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trnt1Q8K1J6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trnt1Q8K1J6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trnt1Q8K1J6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18■□□□□ 0.47
Trnt1Q8K1J6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trnt1Q8K1J6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Trnt1Q8K1J6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trnt1Q8K1J6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18■□□□□ 0.47
Trnt1Q8K1J6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trnt1Q8K1J6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trnt1Q8K1J6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18■□□□□ 0.47
Trnt1Q8K1J6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trnt1Q8K1J6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trnt1Q8K1J6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trnt1Q8K1J6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trnt1Q8K1J6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trnt1Q8K1J6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trnt1Q8K1J6 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.99■□□□□ 0.47
Trnt1Q8K1J6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trnt1Q8K1J6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.99■□□□□ 0.47
Trnt1Q8K1J6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trnt1Q8K1J6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trnt1Q8K1J6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trnt1Q8K1J6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trnt1Q8K1J6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trnt1Q8K1J6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trnt1Q8K1J6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trnt1Q8K1J6 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trnt1Q8K1J6 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trnt1Q8K1J6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.98■□□□□ 0.47
Trnt1Q8K1J6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.98■□□□□ 0.47
Trnt1Q8K1J6 Gm10033-202ENSMUST00000211874 928 ntBASIC17.98■□□□□ 0.47
Trnt1Q8K1J6 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trnt1Q8K1J6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trnt1Q8K1J6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trnt1Q8K1J6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.98■□□□□ 0.47
Trnt1Q8K1J6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trnt1Q8K1J6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trnt1Q8K1J6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trnt1Q8K1J6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trnt1Q8K1J6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trnt1Q8K1J6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trnt1Q8K1J6 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.97■□□□□ 0.47
Trnt1Q8K1J6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trnt1Q8K1J6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trnt1Q8K1J6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
Trnt1Q8K1J6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trnt1Q8K1J6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trnt1Q8K1J6 Gm5874-201ENSMUST00000096101 508 ntBASIC17.97■□□□□ 0.47
Trnt1Q8K1J6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trnt1Q8K1J6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trnt1Q8K1J6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trnt1Q8K1J6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trnt1Q8K1J6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Trnt1Q8K1J6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.96■□□□□ 0.47
Trnt1Q8K1J6 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.96■□□□□ 0.47
Trnt1Q8K1J6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trnt1Q8K1J6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trnt1Q8K1J6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trnt1Q8K1J6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trnt1Q8K1J6 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.96■□□□□ 0.47
Trnt1Q8K1J6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trnt1Q8K1J6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trnt1Q8K1J6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trnt1Q8K1J6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trnt1Q8K1J6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trnt1Q8K1J6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trnt1Q8K1J6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trnt1Q8K1J6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.95■□□□□ 0.46
Trnt1Q8K1J6 Gm42642-201ENSMUST00000200683 355 ntBASIC17.95■□□□□ 0.46
Trnt1Q8K1J6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trnt1Q8K1J6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trnt1Q8K1J6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trnt1Q8K1J6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trnt1Q8K1J6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trnt1Q8K1J6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.95■□□□□ 0.46
Trnt1Q8K1J6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trnt1Q8K1J6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trnt1Q8K1J6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trnt1Q8K1J6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.94■□□□□ 0.46
Trnt1Q8K1J6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trnt1Q8K1J6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trnt1Q8K1J6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.94■□□□□ 0.46
Trnt1Q8K1J6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trnt1Q8K1J6 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms