Protein–RNA interactions for Protein: Q8CEF8

Rnf222, RING finger protein 222, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf222Q8CEF8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf222Q8CEF8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rnf222Q8CEF8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rnf222Q8CEF8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rnf222Q8CEF8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf222Q8CEF8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.2■□□□□ 0.5
Rnf222Q8CEF8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.2■□□□□ 0.5
Rnf222Q8CEF8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf222Q8CEF8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.2■□□□□ 0.5
Rnf222Q8CEF8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf222Q8CEF8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf222Q8CEF8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf222Q8CEF8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf222Q8CEF8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rnf222Q8CEF8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf222Q8CEF8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf222Q8CEF8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf222Q8CEF8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rnf222Q8CEF8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rnf222Q8CEF8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.19■□□□□ 0.5
Rnf222Q8CEF8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf222Q8CEF8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf222Q8CEF8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.19■□□□□ 0.5
Rnf222Q8CEF8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rnf222Q8CEF8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf222Q8CEF8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf222Q8CEF8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf222Q8CEF8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rnf222Q8CEF8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf222Q8CEF8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf222Q8CEF8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rnf222Q8CEF8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf222Q8CEF8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf222Q8CEF8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf222Q8CEF8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf222Q8CEF8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf222Q8CEF8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf222Q8CEF8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.18■□□□□ 0.5
Rnf222Q8CEF8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf222Q8CEF8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Rnf222Q8CEF8 Gm2399-201ENSMUST00000104944 225 ntBASIC18.18■□□□□ 0.5
Rnf222Q8CEF8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf222Q8CEF8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf222Q8CEF8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf222Q8CEF8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf222Q8CEF8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Rnf222Q8CEF8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf222Q8CEF8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf222Q8CEF8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf222Q8CEF8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf222Q8CEF8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf222Q8CEF8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf222Q8CEF8 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.17■□□□□ 0.5
Rnf222Q8CEF8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.17■□□□□ 0.5
Rnf222Q8CEF8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf222Q8CEF8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf222Q8CEF8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf222Q8CEF8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf222Q8CEF8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf222Q8CEF8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf222Q8CEF8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rnf222Q8CEF8 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.17■□□□□ 0.5
Rnf222Q8CEF8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf222Q8CEF8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Rnf222Q8CEF8 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.17■□□□□ 0.5
Rnf222Q8CEF8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf222Q8CEF8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf222Q8CEF8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf222Q8CEF8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf222Q8CEF8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf222Q8CEF8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf222Q8CEF8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf222Q8CEF8 Flg-201ENSMUST00000050758 1488 ntBASIC18.16■□□□□ 0.5
Rnf222Q8CEF8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf222Q8CEF8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf222Q8CEF8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf222Q8CEF8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf222Q8CEF8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
Rnf222Q8CEF8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rnf222Q8CEF8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf222Q8CEF8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf222Q8CEF8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf222Q8CEF8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf222Q8CEF8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf222Q8CEF8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf222Q8CEF8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf222Q8CEF8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf222Q8CEF8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf222Q8CEF8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rnf222Q8CEF8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rnf222Q8CEF8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.15■□□□□ 0.5
Rnf222Q8CEF8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.15■□□□□ 0.5
Rnf222Q8CEF8 Gm27275-201ENSMUST00000184318 272 ntBASIC18.15■□□□□ 0.5
Rnf222Q8CEF8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.15■□□□□ 0.5
Rnf222Q8CEF8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf222Q8CEF8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.15■□□□□ 0.5
Rnf222Q8CEF8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf222Q8CEF8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf222Q8CEF8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf222Q8CEF8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms