Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.98■□□□□ 0.79
Vcpip1Q8CDG3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vcpip1Q8CDG3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vcpip1Q8CDG3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Vcpip1Q8CDG3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vcpip1Q8CDG3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vcpip1Q8CDG3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.97■□□□□ 0.79
Vcpip1Q8CDG3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vcpip1Q8CDG3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.97■□□□□ 0.79
Vcpip1Q8CDG3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.97■□□□□ 0.79
Vcpip1Q8CDG3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vcpip1Q8CDG3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Vcpip1Q8CDG3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vcpip1Q8CDG3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Vcpip1Q8CDG3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Vcpip1Q8CDG3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Vcpip1Q8CDG3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.97■□□□□ 0.79
Vcpip1Q8CDG3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Vcpip1Q8CDG3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vcpip1Q8CDG3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vcpip1Q8CDG3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vcpip1Q8CDG3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vcpip1Q8CDG3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vcpip1Q8CDG3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.96■□□□□ 0.79
Vcpip1Q8CDG3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Vcpip1Q8CDG3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vcpip1Q8CDG3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.96■□□□□ 0.79
Vcpip1Q8CDG3 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.96■□□□□ 0.79
Vcpip1Q8CDG3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Vcpip1Q8CDG3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Vcpip1Q8CDG3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vcpip1Q8CDG3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vcpip1Q8CDG3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vcpip1Q8CDG3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vcpip1Q8CDG3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.96■□□□□ 0.79
Vcpip1Q8CDG3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vcpip1Q8CDG3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vcpip1Q8CDG3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Vcpip1Q8CDG3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vcpip1Q8CDG3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.95■□□□□ 0.78
Vcpip1Q8CDG3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vcpip1Q8CDG3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vcpip1Q8CDG3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Vcpip1Q8CDG3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vcpip1Q8CDG3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Vcpip1Q8CDG3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Vcpip1Q8CDG3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Vcpip1Q8CDG3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.94■□□□□ 0.78
Vcpip1Q8CDG3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Vcpip1Q8CDG3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vcpip1Q8CDG3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Vcpip1Q8CDG3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Vcpip1Q8CDG3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vcpip1Q8CDG3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vcpip1Q8CDG3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.93■□□□□ 0.78
Vcpip1Q8CDG3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vcpip1Q8CDG3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vcpip1Q8CDG3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vcpip1Q8CDG3 Gm43060-201ENSMUST00000200621 289 ntBASIC19.93■□□□□ 0.78
Vcpip1Q8CDG3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Vcpip1Q8CDG3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.93■□□□□ 0.78
Vcpip1Q8CDG3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vcpip1Q8CDG3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vcpip1Q8CDG3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vcpip1Q8CDG3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.93■□□□□ 0.78
Vcpip1Q8CDG3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Vcpip1Q8CDG3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vcpip1Q8CDG3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Vcpip1Q8CDG3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vcpip1Q8CDG3 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.93■□□□□ 0.78
Vcpip1Q8CDG3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vcpip1Q8CDG3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vcpip1Q8CDG3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vcpip1Q8CDG3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vcpip1Q8CDG3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vcpip1Q8CDG3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vcpip1Q8CDG3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vcpip1Q8CDG3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vcpip1Q8CDG3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vcpip1Q8CDG3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.92■□□□□ 0.78
Vcpip1Q8CDG3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.92■□□□□ 0.78
Vcpip1Q8CDG3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.92■□□□□ 0.78
Vcpip1Q8CDG3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vcpip1Q8CDG3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Vcpip1Q8CDG3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.92■□□□□ 0.78
Vcpip1Q8CDG3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.92■□□□□ 0.78
Vcpip1Q8CDG3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vcpip1Q8CDG3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vcpip1Q8CDG3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vcpip1Q8CDG3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vcpip1Q8CDG3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vcpip1Q8CDG3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vcpip1Q8CDG3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vcpip1Q8CDG3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vcpip1Q8CDG3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.91■□□□□ 0.78
Vcpip1Q8CDG3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vcpip1Q8CDG3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vcpip1Q8CDG3 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.91■□□□□ 0.78
Vcpip1Q8CDG3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vcpip1Q8CDG3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms