Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
SynpoQ8CC35 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SynpoQ8CC35 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SynpoQ8CC35 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SynpoQ8CC35 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.91■□□□□ 0.46
SynpoQ8CC35 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SynpoQ8CC35 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SynpoQ8CC35 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.91■□□□□ 0.46
SynpoQ8CC35 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.91■□□□□ 0.46
SynpoQ8CC35 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SynpoQ8CC35 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.91■□□□□ 0.46
SynpoQ8CC35 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SynpoQ8CC35 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SynpoQ8CC35 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SynpoQ8CC35 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SynpoQ8CC35 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.91■□□□□ 0.46
SynpoQ8CC35 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SynpoQ8CC35 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SynpoQ8CC35 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SynpoQ8CC35 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.9■□□□□ 0.46
SynpoQ8CC35 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SynpoQ8CC35 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SynpoQ8CC35 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SynpoQ8CC35 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SynpoQ8CC35 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SynpoQ8CC35 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SynpoQ8CC35 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SynpoQ8CC35 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SynpoQ8CC35 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SynpoQ8CC35 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SynpoQ8CC35 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SynpoQ8CC35 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.9■□□□□ 0.46
SynpoQ8CC35 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SynpoQ8CC35 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SynpoQ8CC35 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SynpoQ8CC35 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.89■□□□□ 0.46
SynpoQ8CC35 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
SynpoQ8CC35 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SynpoQ8CC35 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
SynpoQ8CC35 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SynpoQ8CC35 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SynpoQ8CC35 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.89■□□□□ 0.45
SynpoQ8CC35 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.89■□□□□ 0.45
SynpoQ8CC35 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SynpoQ8CC35 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SynpoQ8CC35 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.89■□□□□ 0.45
SynpoQ8CC35 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.89■□□□□ 0.45
SynpoQ8CC35 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SynpoQ8CC35 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SynpoQ8CC35 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SynpoQ8CC35 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SynpoQ8CC35 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SynpoQ8CC35 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SynpoQ8CC35 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SynpoQ8CC35 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SynpoQ8CC35 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SynpoQ8CC35 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.88■□□□□ 0.45
SynpoQ8CC35 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.88■□□□□ 0.45
SynpoQ8CC35 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SynpoQ8CC35 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SynpoQ8CC35 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SynpoQ8CC35 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SynpoQ8CC35 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SynpoQ8CC35 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SynpoQ8CC35 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SynpoQ8CC35 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SynpoQ8CC35 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SynpoQ8CC35 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SynpoQ8CC35 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SynpoQ8CC35 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SynpoQ8CC35 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SynpoQ8CC35 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SynpoQ8CC35 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SynpoQ8CC35 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SynpoQ8CC35 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SynpoQ8CC35 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SynpoQ8CC35 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SynpoQ8CC35 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SynpoQ8CC35 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SynpoQ8CC35 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SynpoQ8CC35 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SynpoQ8CC35 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SynpoQ8CC35 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SynpoQ8CC35 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SynpoQ8CC35 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SynpoQ8CC35 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SynpoQ8CC35 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SynpoQ8CC35 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SynpoQ8CC35 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SynpoQ8CC35 Mir5133-201ENSMUST00000174955 77 ntBASIC17.86■□□□□ 0.45
SynpoQ8CC35 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SynpoQ8CC35 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SynpoQ8CC35 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SynpoQ8CC35 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.86■□□□□ 0.45
SynpoQ8CC35 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.86■□□□□ 0.45
SynpoQ8CC35 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SynpoQ8CC35 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SynpoQ8CC35 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SynpoQ8CC35 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SynpoQ8CC35 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms