Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Scfd1Q8BRF7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
Scfd1Q8BRF7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scfd1Q8BRF7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scfd1Q8BRF7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Scfd1Q8BRF7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scfd1Q8BRF7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scfd1Q8BRF7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scfd1Q8BRF7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scfd1Q8BRF7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scfd1Q8BRF7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scfd1Q8BRF7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.33■■□□□ 1.01
Scfd1Q8BRF7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scfd1Q8BRF7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Scfd1Q8BRF7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.33■■□□□ 1
Scfd1Q8BRF7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Scfd1Q8BRF7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Scfd1Q8BRF7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Scfd1Q8BRF7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scfd1Q8BRF7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Scfd1Q8BRF7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Scfd1Q8BRF7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scfd1Q8BRF7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Scfd1Q8BRF7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scfd1Q8BRF7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scfd1Q8BRF7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Scfd1Q8BRF7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scfd1Q8BRF7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scfd1Q8BRF7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scfd1Q8BRF7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scfd1Q8BRF7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scfd1Q8BRF7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Scfd1Q8BRF7 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Scfd1Q8BRF7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.31■■□□□ 1
Scfd1Q8BRF7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scfd1Q8BRF7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scfd1Q8BRF7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scfd1Q8BRF7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.31■■□□□ 1
Scfd1Q8BRF7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scfd1Q8BRF7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.3■■□□□ 1
Scfd1Q8BRF7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scfd1Q8BRF7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.3■■□□□ 1
Scfd1Q8BRF7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.3■■□□□ 1
Scfd1Q8BRF7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Scfd1Q8BRF7 Gm10252-201ENSMUST00000209541 832 ntBASIC21.3■■□□□ 1
Scfd1Q8BRF7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scfd1Q8BRF7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scfd1Q8BRF7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scfd1Q8BRF7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scfd1Q8BRF7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Scfd1Q8BRF7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scfd1Q8BRF7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scfd1Q8BRF7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scfd1Q8BRF7 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.29■■□□□ 1
Scfd1Q8BRF7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Scfd1Q8BRF7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.29■■□□□ 1
Scfd1Q8BRF7 Gm22325-201ENSMUST00000158904 308 ntBASIC21.29■■□□□ 1
Scfd1Q8BRF7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.29■■□□□ 1
Scfd1Q8BRF7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
Scfd1Q8BRF7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.29■■□□□ 1
Scfd1Q8BRF7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.28■■□□□ 1
Scfd1Q8BRF7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Scfd1Q8BRF7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scfd1Q8BRF7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.28■■□□□ 1
Scfd1Q8BRF7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.28■■□□□ 1
Scfd1Q8BRF7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.28■■□□□ 1
Scfd1Q8BRF7 Gm18666-201ENSMUST00000190039 958 ntBASIC21.28■■□□□ 1
Scfd1Q8BRF7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.28■■□□□ 1
Scfd1Q8BRF7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.28■■□□□ 1
Scfd1Q8BRF7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.28■■□□□ 1
Scfd1Q8BRF7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Scfd1Q8BRF7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scfd1Q8BRF7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scfd1Q8BRF7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Scfd1Q8BRF7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Scfd1Q8BRF7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scfd1Q8BRF7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
Scfd1Q8BRF7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.27■■□□□ 1
Scfd1Q8BRF7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.27■■□□□ 1
Scfd1Q8BRF7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.27■■□□□ 1
Scfd1Q8BRF7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.27■■□□□ 1
Scfd1Q8BRF7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.27■■□□□ 1
Scfd1Q8BRF7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scfd1Q8BRF7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.27■■□□□ 1
Scfd1Q8BRF7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scfd1Q8BRF7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scfd1Q8BRF7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scfd1Q8BRF7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Scfd1Q8BRF7 Flg-201ENSMUST00000050758 1488 ntBASIC21.26■□□□□ 0.99
Scfd1Q8BRF7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scfd1Q8BRF7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Scfd1Q8BRF7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scfd1Q8BRF7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Scfd1Q8BRF7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scfd1Q8BRF7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scfd1Q8BRF7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scfd1Q8BRF7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Scfd1Q8BRF7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scfd1Q8BRF7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Scfd1Q8BRF7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms