Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Shank2Q80Z38 Gm9103-201ENSMUST00000119371 405 ntBASIC24.25■■□□□ 1.47
Shank2Q80Z38 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Shank2Q80Z38 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Shank2Q80Z38 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Shank2Q80Z38 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Shank2Q80Z38 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Shank2Q80Z38 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Shank2Q80Z38 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC24.25■■□□□ 1.47
Shank2Q80Z38 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Shank2Q80Z38 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Shank2Q80Z38 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Shank2Q80Z38 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC24.24■■□□□ 1.47
Shank2Q80Z38 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Shank2Q80Z38 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Shank2Q80Z38 Gm20100-201ENSMUST00000209418 2272 ntBASIC24.24■■□□□ 1.47
Shank2Q80Z38 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Shank2Q80Z38 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Shank2Q80Z38 Ank2-226ENSMUST00000189368 339 ntBASIC24.23■■□□□ 1.47
Shank2Q80Z38 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC24.23■■□□□ 1.47
Shank2Q80Z38 Gm18959-201ENSMUST00000208954 655 ntBASIC24.23■■□□□ 1.47
Shank2Q80Z38 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Shank2Q80Z38 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Shank2Q80Z38 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Shank2Q80Z38 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Shank2Q80Z38 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Shank2Q80Z38 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC24.23■■□□□ 1.47
Shank2Q80Z38 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Shank2Q80Z38 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Shank2Q80Z38 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Shank2Q80Z38 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Shank2Q80Z38 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC24.22■■□□□ 1.47
Shank2Q80Z38 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC24.22■■□□□ 1.47
Shank2Q80Z38 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Shank2Q80Z38 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Shank2Q80Z38 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Shank2Q80Z38 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Shank2Q80Z38 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Shank2Q80Z38 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Shank2Q80Z38 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Shank2Q80Z38 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Shank2Q80Z38 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Shank2Q80Z38 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Shank2Q80Z38 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC24.21■■□□□ 1.47
Shank2Q80Z38 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Shank2Q80Z38 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Shank2Q80Z38 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Shank2Q80Z38 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Shank2Q80Z38 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Shank2Q80Z38 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Shank2Q80Z38 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Shank2Q80Z38 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC24.2■■□□□ 1.47
Shank2Q80Z38 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Shank2Q80Z38 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.47
Shank2Q80Z38 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC24.2■■□□□ 1.47
Shank2Q80Z38 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Shank2Q80Z38 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Shank2Q80Z38 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Shank2Q80Z38 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Shank2Q80Z38 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC24.2■■□□□ 1.46
Shank2Q80Z38 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Shank2Q80Z38 AC159205.6-201ENSMUST00000224935 887 ntBASIC24.19■■□□□ 1.46
Shank2Q80Z38 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
Shank2Q80Z38 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Shank2Q80Z38 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Shank2Q80Z38 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Shank2Q80Z38 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Shank2Q80Z38 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Shank2Q80Z38 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Shank2Q80Z38 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Shank2Q80Z38 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC24.19■■□□□ 1.46
Shank2Q80Z38 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Shank2Q80Z38 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
Shank2Q80Z38 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Shank2Q80Z38 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Shank2Q80Z38 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Shank2Q80Z38 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Shank2Q80Z38 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Shank2Q80Z38 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Shank2Q80Z38 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC24.18■■□□□ 1.46
Shank2Q80Z38 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Shank2Q80Z38 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
Shank2Q80Z38 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC24.17■■□□□ 1.46
Shank2Q80Z38 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Shank2Q80Z38 Gm12382-201ENSMUST00000122005 922 ntBASIC24.17■■□□□ 1.46
Shank2Q80Z38 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC24.17■■□□□ 1.46
Shank2Q80Z38 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Shank2Q80Z38 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Shank2Q80Z38 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Shank2Q80Z38 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Shank2Q80Z38 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Shank2Q80Z38 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC24.16■■□□□ 1.46
Shank2Q80Z38 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC24.16■■□□□ 1.46
Shank2Q80Z38 Gm17971-201ENSMUST00000190239 806 ntBASIC24.16■■□□□ 1.46
Shank2Q80Z38 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Shank2Q80Z38 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Shank2Q80Z38 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Shank2Q80Z38 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Shank2Q80Z38 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Shank2Q80Z38 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms