Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpp38Q80UU2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpp38Q80UU2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rpp38Q80UU2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.64■□□□□ 0.57
Rpp38Q80UU2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpp38Q80UU2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpp38Q80UU2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rpp38Q80UU2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpp38Q80UU2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpp38Q80UU2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rpp38Q80UU2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpp38Q80UU2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpp38Q80UU2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpp38Q80UU2 Gm42569-201ENSMUST00000200539 472 ntBASIC18.63■□□□□ 0.57
Rpp38Q80UU2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Rpp38Q80UU2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpp38Q80UU2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpp38Q80UU2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpp38Q80UU2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Rpp38Q80UU2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.63■□□□□ 0.57
Rpp38Q80UU2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpp38Q80UU2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpp38Q80UU2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.62■□□□□ 0.57
Rpp38Q80UU2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpp38Q80UU2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rpp38Q80UU2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.62■□□□□ 0.57
Rpp38Q80UU2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpp38Q80UU2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rpp38Q80UU2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpp38Q80UU2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rpp38Q80UU2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rpp38Q80UU2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rpp38Q80UU2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Rpp38Q80UU2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpp38Q80UU2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rpp38Q80UU2 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.61■□□□□ 0.57
Rpp38Q80UU2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.61■□□□□ 0.57
Rpp38Q80UU2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.61■□□□□ 0.57
Rpp38Q80UU2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpp38Q80UU2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpp38Q80UU2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpp38Q80UU2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpp38Q80UU2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpp38Q80UU2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rpp38Q80UU2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpp38Q80UU2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rpp38Q80UU2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpp38Q80UU2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpp38Q80UU2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpp38Q80UU2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpp38Q80UU2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpp38Q80UU2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rpp38Q80UU2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpp38Q80UU2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rpp38Q80UU2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rpp38Q80UU2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpp38Q80UU2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpp38Q80UU2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpp38Q80UU2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpp38Q80UU2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpp38Q80UU2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpp38Q80UU2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rpp38Q80UU2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rpp38Q80UU2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rpp38Q80UU2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rpp38Q80UU2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
Rpp38Q80UU2 Gm27405-201ENSMUST00000184201 112 ntBASIC18.58■□□□□ 0.56
Rpp38Q80UU2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.58■□□□□ 0.56
Rpp38Q80UU2 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.58■□□□□ 0.56
Rpp38Q80UU2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpp38Q80UU2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpp38Q80UU2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpp38Q80UU2 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.58■□□□□ 0.56
Rpp38Q80UU2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpp38Q80UU2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpp38Q80UU2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rpp38Q80UU2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rpp38Q80UU2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.57■□□□□ 0.56
Rpp38Q80UU2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.57■□□□□ 0.56
Rpp38Q80UU2 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.57■□□□□ 0.56
Rpp38Q80UU2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpp38Q80UU2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.57■□□□□ 0.56
Rpp38Q80UU2 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.57■□□□□ 0.56
Rpp38Q80UU2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpp38Q80UU2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpp38Q80UU2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rpp38Q80UU2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.56■□□□□ 0.56
Rpp38Q80UU2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpp38Q80UU2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpp38Q80UU2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Rpp38Q80UU2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpp38Q80UU2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.56■□□□□ 0.56
Rpp38Q80UU2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp38Q80UU2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp38Q80UU2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp38Q80UU2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp38Q80UU2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp38Q80UU2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.55■□□□□ 0.56
Rpp38Q80UU2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rpp38Q80UU2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms