Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ddx58Q6Q899 Hsf1-204ENSMUST00000226872 2104 ntBASIC23.08■■□□□ 1.28
Ddx58Q6Q899 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ddx58Q6Q899 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ddx58Q6Q899 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ddx58Q6Q899 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC23.07■■□□□ 1.28
Ddx58Q6Q899 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ddx58Q6Q899 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC23.07■■□□□ 1.28
Ddx58Q6Q899 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Ddx58Q6Q899 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Ddx58Q6Q899 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ddx58Q6Q899 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ddx58Q6Q899 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ddx58Q6Q899 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ddx58Q6Q899 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC23.06■■□□□ 1.28
Ddx58Q6Q899 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC23.06■■□□□ 1.28
Ddx58Q6Q899 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC23.06■■□□□ 1.28
Ddx58Q6Q899 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ddx58Q6Q899 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ddx58Q6Q899 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Ddx58Q6Q899 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ddx58Q6Q899 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC23.05■■□□□ 1.28
Ddx58Q6Q899 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx58Q6Q899 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC23.05■■□□□ 1.28
Ddx58Q6Q899 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC23.05■■□□□ 1.28
Ddx58Q6Q899 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx58Q6Q899 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx58Q6Q899 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx58Q6Q899 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx58Q6Q899 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx58Q6Q899 Gm21596-201ENSMUST00000178049 1316 ntBASIC23.05■■□□□ 1.28
Ddx58Q6Q899 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx58Q6Q899 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx58Q6Q899 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx58Q6Q899 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx58Q6Q899 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx58Q6Q899 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx58Q6Q899 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx58Q6Q899 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC23.04■■□□□ 1.28
Ddx58Q6Q899 Gm11249-201ENSMUST00000117071 859 ntBASIC23.04■■□□□ 1.28
Ddx58Q6Q899 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx58Q6Q899 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx58Q6Q899 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx58Q6Q899 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx58Q6Q899 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx58Q6Q899 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx58Q6Q899 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC23.04■■□□□ 1.28
Ddx58Q6Q899 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx58Q6Q899 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx58Q6Q899 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Ddx58Q6Q899 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx58Q6Q899 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx58Q6Q899 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ddx58Q6Q899 Gm2399-201ENSMUST00000104944 225 ntBASIC23.03■■□□□ 1.28
Ddx58Q6Q899 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC23.03■■□□□ 1.28
Ddx58Q6Q899 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC23.03■■□□□ 1.28
Ddx58Q6Q899 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ddx58Q6Q899 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ddx58Q6Q899 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ddx58Q6Q899 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ddx58Q6Q899 Gm5643-201ENSMUST00000117081 966 ntBASIC23.02■■□□□ 1.28
Ddx58Q6Q899 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ddx58Q6Q899 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ddx58Q6Q899 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ddx58Q6Q899 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Ddx58Q6Q899 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ddx58Q6Q899 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ddx58Q6Q899 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ddx58Q6Q899 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ddx58Q6Q899 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ddx58Q6Q899 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ddx58Q6Q899 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ddx58Q6Q899 Gm15847-201ENSMUST00000121417 1065 ntBASIC23.01■■□□□ 1.27
Ddx58Q6Q899 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC23.01■■□□□ 1.27
Ddx58Q6Q899 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ddx58Q6Q899 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Ddx58Q6Q899 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Ddx58Q6Q899 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ddx58Q6Q899 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC23■■□□□ 1.27
Ddx58Q6Q899 Gm22325-201ENSMUST00000158904 308 ntBASIC23■■□□□ 1.27
Ddx58Q6Q899 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ddx58Q6Q899 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ddx58Q6Q899 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC23■■□□□ 1.27
Ddx58Q6Q899 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ddx58Q6Q899 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ddx58Q6Q899 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Ddx58Q6Q899 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Ddx58Q6Q899 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ddx58Q6Q899 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ddx58Q6Q899 Gm10812-201ENSMUST00000099864 546 ntBASIC22.99■■□□□ 1.27
Ddx58Q6Q899 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ddx58Q6Q899 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ddx58Q6Q899 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ddx58Q6Q899 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ddx58Q6Q899 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ddx58Q6Q899 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC22.98■■□□□ 1.27
Ddx58Q6Q899 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ddx58Q6Q899 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ddx58Q6Q899 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC22.98■■□□□ 1.27
Ddx58Q6Q899 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms