Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.88■□□□□ 0.61
Sp140Q6NSQ5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sp140Q6NSQ5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sp140Q6NSQ5 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sp140Q6NSQ5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sp140Q6NSQ5 Gm13146-201ENSMUST00000118508 780 ntBASIC18.87■□□□□ 0.61
Sp140Q6NSQ5 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.87■□□□□ 0.61
Sp140Q6NSQ5 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Sp140Q6NSQ5 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Sp140Q6NSQ5 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sp140Q6NSQ5 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sp140Q6NSQ5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.87■□□□□ 0.61
Sp140Q6NSQ5 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sp140Q6NSQ5 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
Sp140Q6NSQ5 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sp140Q6NSQ5 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sp140Q6NSQ5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sp140Q6NSQ5 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.87■□□□□ 0.61
Sp140Q6NSQ5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sp140Q6NSQ5 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sp140Q6NSQ5 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sp140Q6NSQ5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sp140Q6NSQ5 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.86■□□□□ 0.61
Sp140Q6NSQ5 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Sp140Q6NSQ5 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Sp140Q6NSQ5 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.86■□□□□ 0.61
Sp140Q6NSQ5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sp140Q6NSQ5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sp140Q6NSQ5 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.86■□□□□ 0.61
Sp140Q6NSQ5 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.86■□□□□ 0.61
Sp140Q6NSQ5 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.86■□□□□ 0.61
Sp140Q6NSQ5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sp140Q6NSQ5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sp140Q6NSQ5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sp140Q6NSQ5 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sp140Q6NSQ5 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sp140Q6NSQ5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sp140Q6NSQ5 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sp140Q6NSQ5 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sp140Q6NSQ5 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sp140Q6NSQ5 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sp140Q6NSQ5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sp140Q6NSQ5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sp140Q6NSQ5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sp140Q6NSQ5 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.85■□□□□ 0.61
Sp140Q6NSQ5 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sp140Q6NSQ5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sp140Q6NSQ5 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sp140Q6NSQ5 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Sp140Q6NSQ5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sp140Q6NSQ5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sp140Q6NSQ5 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sp140Q6NSQ5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sp140Q6NSQ5 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sp140Q6NSQ5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sp140Q6NSQ5 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Sp140Q6NSQ5 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Sp140Q6NSQ5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.84■□□□□ 0.61
Sp140Q6NSQ5 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sp140Q6NSQ5 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sp140Q6NSQ5 Gm13234-201ENSMUST00000120010 747 ntBASIC18.83■□□□□ 0.6
Sp140Q6NSQ5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sp140Q6NSQ5 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sp140Q6NSQ5 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sp140Q6NSQ5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sp140Q6NSQ5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sp140Q6NSQ5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sp140Q6NSQ5 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sp140Q6NSQ5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sp140Q6NSQ5 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sp140Q6NSQ5 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.82■□□□□ 0.6
Sp140Q6NSQ5 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sp140Q6NSQ5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.82■□□□□ 0.6
Sp140Q6NSQ5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sp140Q6NSQ5 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sp140Q6NSQ5 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.82■□□□□ 0.6
Sp140Q6NSQ5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Sp140Q6NSQ5 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sp140Q6NSQ5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sp140Q6NSQ5 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Sp140Q6NSQ5 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sp140Q6NSQ5 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sp140Q6NSQ5 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sp140Q6NSQ5 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sp140Q6NSQ5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sp140Q6NSQ5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sp140Q6NSQ5 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.81■□□□□ 0.6
Sp140Q6NSQ5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sp140Q6NSQ5 Gm13534-201ENSMUST00000121169 513 ntBASIC18.81■□□□□ 0.6
Sp140Q6NSQ5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.81■□□□□ 0.6
Sp140Q6NSQ5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sp140Q6NSQ5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Sp140Q6NSQ5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sp140Q6NSQ5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sp140Q6NSQ5 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sp140Q6NSQ5 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.8■□□□□ 0.6
Sp140Q6NSQ5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sp140Q6NSQ5 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sp140Q6NSQ5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sp140Q6NSQ5 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms