Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga7Q6DD96 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga7Q6DD96 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga7Q6DD96 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga7Q6DD96 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga7Q6DD96 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga7Q6DD96 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga7Q6DD96 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga7Q6DD96 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Pcdhga7Q6DD96 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga7Q6DD96 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga7Q6DD96 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga7Q6DD96 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga7Q6DD96 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
Pcdhga7Q6DD96 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga7Q6DD96 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga7Q6DD96 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga7Q6DD96 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga7Q6DD96 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga7Q6DD96 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga7Q6DD96 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhga7Q6DD96 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhga7Q6DD96 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.01■□□□□ 0.47
Pcdhga7Q6DD96 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhga7Q6DD96 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhga7Q6DD96 Gm43017-201ENSMUST00000198296 752 ntBASIC18.01■□□□□ 0.47
Pcdhga7Q6DD96 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga7Q6DD96 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga7Q6DD96 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga7Q6DD96 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga7Q6DD96 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga7Q6DD96 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga7Q6DD96 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga7Q6DD96 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18■□□□□ 0.47
Pcdhga7Q6DD96 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga7Q6DD96 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga7Q6DD96 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga7Q6DD96 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18■□□□□ 0.47
Pcdhga7Q6DD96 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga7Q6DD96 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga7Q6DD96 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga7Q6DD96 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga7Q6DD96 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga7Q6DD96 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhga7Q6DD96 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga7Q6DD96 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga7Q6DD96 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga7Q6DD96 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga7Q6DD96 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga7Q6DD96 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga7Q6DD96 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga7Q6DD96 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhga7Q6DD96 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga7Q6DD96 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga7Q6DD96 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga7Q6DD96 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhga7Q6DD96 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pcdhga7Q6DD96 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.98■□□□□ 0.47
Pcdhga7Q6DD96 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga7Q6DD96 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga7Q6DD96 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga7Q6DD96 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhga7Q6DD96 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.98■□□□□ 0.47
Pcdhga7Q6DD96 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhga7Q6DD96 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga7Q6DD96 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga7Q6DD96 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga7Q6DD96 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga7Q6DD96 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga7Q6DD96 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhga7Q6DD96 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga7Q6DD96 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga7Q6DD96 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga7Q6DD96 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga7Q6DD96 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga7Q6DD96 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga7Q6DD96 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga7Q6DD96 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga7Q6DD96 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.97■□□□□ 0.47
Pcdhga7Q6DD96 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga7Q6DD96 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhga7Q6DD96 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga7Q6DD96 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhga7Q6DD96 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga7Q6DD96 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga7Q6DD96 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga7Q6DD96 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga7Q6DD96 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga7Q6DD96 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga7Q6DD96 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga7Q6DD96 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhga7Q6DD96 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga7Q6DD96 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Pcdhga7Q6DD96 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.96■□□□□ 0.47
Pcdhga7Q6DD96 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga7Q6DD96 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga7Q6DD96 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga7Q6DD96 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.96■□□□□ 0.47
Pcdhga7Q6DD96 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.96■□□□□ 0.47
Pcdhga7Q6DD96 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms