Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AtmQ62388 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.77■□□□□ 0.44
AtmQ62388 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AtmQ62388 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
AtmQ62388 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
AtmQ62388 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
AtmQ62388 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AtmQ62388 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AtmQ62388 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.77■□□□□ 0.43
AtmQ62388 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AtmQ62388 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.76■□□□□ 0.43
AtmQ62388 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AtmQ62388 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
AtmQ62388 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AtmQ62388 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
AtmQ62388 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
AtmQ62388 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AtmQ62388 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.75■□□□□ 0.43
AtmQ62388 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
AtmQ62388 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
AtmQ62388 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AtmQ62388 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
AtmQ62388 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.75■□□□□ 0.43
AtmQ62388 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AtmQ62388 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.75■□□□□ 0.43
AtmQ62388 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AtmQ62388 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AtmQ62388 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AtmQ62388 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AtmQ62388 AA414768-201ENSMUST00000121924 1257 ntBASIC17.75■□□□□ 0.43
AtmQ62388 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AtmQ62388 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
AtmQ62388 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.74■□□□□ 0.43
AtmQ62388 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
AtmQ62388 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
AtmQ62388 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
AtmQ62388 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.74■□□□□ 0.43
AtmQ62388 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AtmQ62388 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AtmQ62388 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
AtmQ62388 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AtmQ62388 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.73■□□□□ 0.43
AtmQ62388 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
AtmQ62388 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AtmQ62388 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AtmQ62388 Gm7284-201ENSMUST00000131667 944 ntBASIC17.73■□□□□ 0.43
AtmQ62388 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
AtmQ62388 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AtmQ62388 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AtmQ62388 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.72■□□□□ 0.43
AtmQ62388 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AtmQ62388 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AtmQ62388 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AtmQ62388 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
AtmQ62388 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AtmQ62388 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AtmQ62388 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AtmQ62388 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
AtmQ62388 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AtmQ62388 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
AtmQ62388 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AtmQ62388 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AtmQ62388 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AtmQ62388 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AtmQ62388 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
AtmQ62388 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AtmQ62388 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.7■□□□□ 0.42
AtmQ62388 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
AtmQ62388 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
AtmQ62388 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AtmQ62388 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AtmQ62388 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
AtmQ62388 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AtmQ62388 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AtmQ62388 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AtmQ62388 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AtmQ62388 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.7■□□□□ 0.42
AtmQ62388 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
AtmQ62388 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AtmQ62388 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AtmQ62388 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.69■□□□□ 0.42
AtmQ62388 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AtmQ62388 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AtmQ62388 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.69■□□□□ 0.42
AtmQ62388 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.69■□□□□ 0.42
AtmQ62388 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
AtmQ62388 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AtmQ62388 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
AtmQ62388 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
AtmQ62388 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.69■□□□□ 0.42
AtmQ62388 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.69■□□□□ 0.42
AtmQ62388 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AtmQ62388 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.69■□□□□ 0.42
AtmQ62388 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AtmQ62388 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
AtmQ62388 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AtmQ62388 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
AtmQ62388 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.68■□□□□ 0.42
AtmQ62388 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AtmQ62388 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms