Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcd1Q61466 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcd1Q61466 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Smarcd1Q61466 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Smarcd1Q61466 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Smarcd1Q61466 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcd1Q61466 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcd1Q61466 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcd1Q61466 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Smarcd1Q61466 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Smarcd1Q61466 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.4■□□□□ 0.7
Smarcd1Q61466 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.4■□□□□ 0.7
Smarcd1Q61466 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.4■□□□□ 0.7
Smarcd1Q61466 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.4■□□□□ 0.7
Smarcd1Q61466 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.4■□□□□ 0.7
Smarcd1Q61466 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcd1Q61466 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Smarcd1Q61466 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcd1Q61466 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcd1Q61466 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Smarcd1Q61466 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcd1Q61466 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcd1Q61466 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Smarcd1Q61466 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcd1Q61466 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.39■□□□□ 0.69
Smarcd1Q61466 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.39■□□□□ 0.69
Smarcd1Q61466 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcd1Q61466 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.39■□□□□ 0.69
Smarcd1Q61466 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcd1Q61466 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcd1Q61466 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcd1Q61466 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcd1Q61466 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.39■□□□□ 0.69
Smarcd1Q61466 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcd1Q61466 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcd1Q61466 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Smarcd1Q61466 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcd1Q61466 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcd1Q61466 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcd1Q61466 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcd1Q61466 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcd1Q61466 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcd1Q61466 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Smarcd1Q61466 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd1Q61466 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd1Q61466 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd1Q61466 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd1Q61466 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd1Q61466 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd1Q61466 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Smarcd1Q61466 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.37■□□□□ 0.69
Smarcd1Q61466 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd1Q61466 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd1Q61466 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd1Q61466 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.37■□□□□ 0.69
Smarcd1Q61466 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd1Q61466 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd1Q61466 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd1Q61466 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Smarcd1Q61466 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Smarcd1Q61466 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcd1Q61466 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcd1Q61466 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcd1Q61466 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcd1Q61466 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcd1Q61466 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.36■□□□□ 0.69
Smarcd1Q61466 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcd1Q61466 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcd1Q61466 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcd1Q61466 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcd1Q61466 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.35■□□□□ 0.69
Smarcd1Q61466 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.35■□□□□ 0.69
Smarcd1Q61466 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcd1Q61466 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Smarcd1Q61466 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Smarcd1Q61466 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcd1Q61466 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcd1Q61466 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcd1Q61466 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcd1Q61466 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcd1Q61466 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcd1Q61466 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcd1Q61466 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcd1Q61466 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcd1Q61466 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcd1Q61466 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Smarcd1Q61466 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcd1Q61466 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.34■□□□□ 0.69
Smarcd1Q61466 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.34■□□□□ 0.69
Smarcd1Q61466 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcd1Q61466 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcd1Q61466 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.34■□□□□ 0.69
Smarcd1Q61466 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcd1Q61466 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcd1Q61466 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcd1Q61466 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcd1Q61466 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcd1Q61466 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcd1Q61466 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcd1Q61466 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms