Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scnn1aQ61180 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
Scnn1aQ61180 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scnn1aQ61180 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scnn1aQ61180 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.49■■□□□ 1.03
Scnn1aQ61180 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Scnn1aQ61180 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.49■■□□□ 1.03
Scnn1aQ61180 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scnn1aQ61180 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.49■■□□□ 1.03
Scnn1aQ61180 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scnn1aQ61180 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Scnn1aQ61180 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scnn1aQ61180 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scnn1aQ61180 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scnn1aQ61180 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.48■■□□□ 1.03
Scnn1aQ61180 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Scnn1aQ61180 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scnn1aQ61180 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scnn1aQ61180 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scnn1aQ61180 Gm22325-201ENSMUST00000158904 308 ntBASIC21.48■■□□□ 1.03
Scnn1aQ61180 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scnn1aQ61180 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Scnn1aQ61180 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scnn1aQ61180 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Scnn1aQ61180 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scnn1aQ61180 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scnn1aQ61180 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scnn1aQ61180 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scnn1aQ61180 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Scnn1aQ61180 Gm18666-201ENSMUST00000190039 958 ntBASIC21.47■■□□□ 1.03
Scnn1aQ61180 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scnn1aQ61180 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.47■■□□□ 1.03
Scnn1aQ61180 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scnn1aQ61180 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scnn1aQ61180 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Scnn1aQ61180 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.46■■□□□ 1.03
Scnn1aQ61180 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.46■■□□□ 1.03
Scnn1aQ61180 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scnn1aQ61180 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scnn1aQ61180 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.46■■□□□ 1.03
Scnn1aQ61180 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Scnn1aQ61180 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Scnn1aQ61180 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scnn1aQ61180 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Scnn1aQ61180 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scnn1aQ61180 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Scnn1aQ61180 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Scnn1aQ61180 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Scnn1aQ61180 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scnn1aQ61180 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Scnn1aQ61180 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Scnn1aQ61180 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scnn1aQ61180 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scnn1aQ61180 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Scnn1aQ61180 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scnn1aQ61180 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scnn1aQ61180 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Scnn1aQ61180 Flg-201ENSMUST00000050758 1488 ntBASIC21.45■■□□□ 1.02
Scnn1aQ61180 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scnn1aQ61180 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scnn1aQ61180 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
Scnn1aQ61180 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scnn1aQ61180 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Scnn1aQ61180 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.44■■□□□ 1.02
Scnn1aQ61180 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Scnn1aQ61180 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
Scnn1aQ61180 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Scnn1aQ61180 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scnn1aQ61180 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scnn1aQ61180 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Scnn1aQ61180 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scnn1aQ61180 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scnn1aQ61180 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Scnn1aQ61180 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.43■■□□□ 1.02
Scnn1aQ61180 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.43■■□□□ 1.02
Scnn1aQ61180 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scnn1aQ61180 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Scnn1aQ61180 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scnn1aQ61180 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scnn1aQ61180 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scnn1aQ61180 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.42■■□□□ 1.02
Scnn1aQ61180 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scnn1aQ61180 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scnn1aQ61180 Gm10252-201ENSMUST00000209541 832 ntBASIC21.42■■□□□ 1.02
Scnn1aQ61180 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.42■■□□□ 1.02
Scnn1aQ61180 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
Scnn1aQ61180 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scnn1aQ61180 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scnn1aQ61180 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scnn1aQ61180 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scnn1aQ61180 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scnn1aQ61180 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Scnn1aQ61180 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Scnn1aQ61180 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scnn1aQ61180 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scnn1aQ61180 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Scnn1aQ61180 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.41■■□□□ 1.02
Scnn1aQ61180 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Scnn1aQ61180 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Scnn1aQ61180 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms