Protein–RNA interactions for Protein: Q5SSE9

Abca13, ATP-binding cassette sub-family A member 13, mousemouse

Predictions only

Length 5,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca13Q5SSE9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Abca13Q5SSE9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC11.14□□□□□ -0.63
Abca13Q5SSE9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Abca13Q5SSE9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Abca13Q5SSE9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Abca13Q5SSE9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC11.13□□□□□ -0.63
Abca13Q5SSE9 Mtag2-201ENSMUST00000058665 714 ntBASIC11.13□□□□□ -0.63
Abca13Q5SSE9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abca13Q5SSE9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abca13Q5SSE9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abca13Q5SSE9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.13□□□□□ -0.63
Abca13Q5SSE9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abca13Q5SSE9 Gm5913-201ENSMUST00000119397 1399 ntBASIC11.13□□□□□ -0.63
Abca13Q5SSE9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC11.13□□□□□ -0.63
Abca13Q5SSE9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abca13Q5SSE9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Abca13Q5SSE9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC11.13□□□□□ -0.63
Abca13Q5SSE9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abca13Q5SSE9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abca13Q5SSE9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Abca13Q5SSE9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Abca13Q5SSE9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abca13Q5SSE9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abca13Q5SSE9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Abca13Q5SSE9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Abca13Q5SSE9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abca13Q5SSE9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abca13Q5SSE9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abca13Q5SSE9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC11.12□□□□□ -0.63
Abca13Q5SSE9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Abca13Q5SSE9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Abca13Q5SSE9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Abca13Q5SSE9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Abca13Q5SSE9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Abca13Q5SSE9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Abca13Q5SSE9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Abca13Q5SSE9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.12□□□□□ -0.63
Abca13Q5SSE9 Timm23-208ENSMUST00000226683 750 ntBASIC11.12□□□□□ -0.63
Abca13Q5SSE9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Abca13Q5SSE9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Abca13Q5SSE9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Abca13Q5SSE9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.12□□□□□ -0.63
Abca13Q5SSE9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Abca13Q5SSE9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Abca13Q5SSE9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC11.12□□□□□ -0.63
Abca13Q5SSE9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Gm8097-201ENSMUST00000117903 829 ntBASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Gm18025-201ENSMUST00000221733 862 ntBASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Abca13Q5SSE9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Abca13Q5SSE9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Abca13Q5SSE9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Abca13Q5SSE9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Abca13Q5SSE9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Abca13Q5SSE9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.1□□□□□ -0.63
Abca13Q5SSE9 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.1□□□□□ -0.63
Abca13Q5SSE9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Abca13Q5SSE9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Abca13Q5SSE9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Abca13Q5SSE9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Abca13Q5SSE9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Abca13Q5SSE9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Abca13Q5SSE9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Abca13Q5SSE9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Abca13Q5SSE9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Abca13Q5SSE9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Abca13Q5SSE9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Abca13Q5SSE9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Abca13Q5SSE9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Abca13Q5SSE9 AC154266.1-201ENSMUST00000223190 503 ntBASIC11.09□□□□□ -0.63
Abca13Q5SSE9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Abca13Q5SSE9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Abca13Q5SSE9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Abca13Q5SSE9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms