Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps13aQ5H8C4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vps13aQ5H8C4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Vps13aQ5H8C4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vps13aQ5H8C4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps13aQ5H8C4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps13aQ5H8C4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps13aQ5H8C4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps13aQ5H8C4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.65■□□□□ 0.58
Vps13aQ5H8C4 Odf3b-204ENSMUST00000227834 930 ntBASIC18.65■□□□□ 0.58
Vps13aQ5H8C4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Vps13aQ5H8C4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Vps13aQ5H8C4 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.64■□□□□ 0.58
Vps13aQ5H8C4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.64■□□□□ 0.57
Vps13aQ5H8C4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.64■□□□□ 0.57
Vps13aQ5H8C4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Vps13aQ5H8C4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vps13aQ5H8C4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vps13aQ5H8C4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vps13aQ5H8C4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps13aQ5H8C4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps13aQ5H8C4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps13aQ5H8C4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Vps13aQ5H8C4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps13aQ5H8C4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps13aQ5H8C4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps13aQ5H8C4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps13aQ5H8C4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.63■□□□□ 0.57
Vps13aQ5H8C4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps13aQ5H8C4 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps13aQ5H8C4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.63■□□□□ 0.57
Vps13aQ5H8C4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Vps13aQ5H8C4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps13aQ5H8C4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps13aQ5H8C4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vps13aQ5H8C4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps13aQ5H8C4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.62■□□□□ 0.57
Vps13aQ5H8C4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vps13aQ5H8C4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps13aQ5H8C4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps13aQ5H8C4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vps13aQ5H8C4 Gm18959-201ENSMUST00000208954 655 ntBASIC18.61■□□□□ 0.57
Vps13aQ5H8C4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Vps13aQ5H8C4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps13aQ5H8C4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps13aQ5H8C4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.61■□□□□ 0.57
Vps13aQ5H8C4 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vps13aQ5H8C4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps13aQ5H8C4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Vps13aQ5H8C4 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Vps13aQ5H8C4 Gm28033-201ENSMUST00000184224 96 ntBASIC18.61■□□□□ 0.57
Vps13aQ5H8C4 Gm18032-201ENSMUST00000222541 538 ntBASIC18.61■□□□□ 0.57
Vps13aQ5H8C4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps13aQ5H8C4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps13aQ5H8C4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Vps13aQ5H8C4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps13aQ5H8C4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Vps13aQ5H8C4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps13aQ5H8C4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps13aQ5H8C4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps13aQ5H8C4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vps13aQ5H8C4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps13aQ5H8C4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Vps13aQ5H8C4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps13aQ5H8C4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.59■□□□□ 0.57
Vps13aQ5H8C4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps13aQ5H8C4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Vps13aQ5H8C4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps13aQ5H8C4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vps13aQ5H8C4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Vps13aQ5H8C4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps13aQ5H8C4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps13aQ5H8C4 Gm42545-201ENSMUST00000202755 922 ntBASIC18.58■□□□□ 0.57
Vps13aQ5H8C4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps13aQ5H8C4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps13aQ5H8C4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vps13aQ5H8C4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.58■□□□□ 0.56
Vps13aQ5H8C4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Vps13aQ5H8C4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps13aQ5H8C4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Vps13aQ5H8C4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps13aQ5H8C4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps13aQ5H8C4 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps13aQ5H8C4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps13aQ5H8C4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps13aQ5H8C4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps13aQ5H8C4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps13aQ5H8C4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps13aQ5H8C4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Vps13aQ5H8C4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.56■□□□□ 0.56
Vps13aQ5H8C4 Timm23-208ENSMUST00000226683 750 ntBASIC18.56■□□□□ 0.56
Vps13aQ5H8C4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.56■□□□□ 0.56
Vps13aQ5H8C4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Vps13aQ5H8C4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps13aQ5H8C4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps13aQ5H8C4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps13aQ5H8C4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.56■□□□□ 0.56
Vps13aQ5H8C4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.56■□□□□ 0.56
Vps13aQ5H8C4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps13aQ5H8C4 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms