Protein–RNA interactions for Protein: Q5BKP2

Usp13, Ubiquitin carboxyl-terminal hydrolase 13, mousemouse

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp13Q5BKP2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.96■□□□□ 0.95
Usp13Q5BKP2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp13Q5BKP2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Usp13Q5BKP2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Usp13Q5BKP2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp13Q5BKP2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp13Q5BKP2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp13Q5BKP2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Usp13Q5BKP2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp13Q5BKP2 Gm27801-201ENSMUST00000184174 223 ntBASIC20.95■□□□□ 0.94
Usp13Q5BKP2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Usp13Q5BKP2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp13Q5BKP2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp13Q5BKP2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp13Q5BKP2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Usp13Q5BKP2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp13Q5BKP2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Usp13Q5BKP2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp13Q5BKP2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Usp13Q5BKP2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp13Q5BKP2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp13Q5BKP2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp13Q5BKP2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp13Q5BKP2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp13Q5BKP2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp13Q5BKP2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp13Q5BKP2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.93■□□□□ 0.94
Usp13Q5BKP2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Usp13Q5BKP2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.93■□□□□ 0.94
Usp13Q5BKP2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp13Q5BKP2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp13Q5BKP2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp13Q5BKP2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp13Q5BKP2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.93■□□□□ 0.94
Usp13Q5BKP2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp13Q5BKP2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.93■□□□□ 0.94
Usp13Q5BKP2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp13Q5BKP2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp13Q5BKP2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp13Q5BKP2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp13Q5BKP2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Usp13Q5BKP2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Usp13Q5BKP2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp13Q5BKP2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp13Q5BKP2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp13Q5BKP2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp13Q5BKP2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.92■□□□□ 0.94
Usp13Q5BKP2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp13Q5BKP2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp13Q5BKP2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp13Q5BKP2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp13Q5BKP2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp13Q5BKP2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Usp13Q5BKP2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp13Q5BKP2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp13Q5BKP2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp13Q5BKP2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp13Q5BKP2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp13Q5BKP2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp13Q5BKP2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp13Q5BKP2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp13Q5BKP2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Usp13Q5BKP2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.9■□□□□ 0.94
Usp13Q5BKP2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.9■□□□□ 0.94
Usp13Q5BKP2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp13Q5BKP2 Gm7514-201ENSMUST00000209475 934 ntBASIC20.9■□□□□ 0.94
Usp13Q5BKP2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp13Q5BKP2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp13Q5BKP2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Usp13Q5BKP2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp13Q5BKP2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp13Q5BKP2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp13Q5BKP2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.9■□□□□ 0.94
Usp13Q5BKP2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp13Q5BKP2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp13Q5BKP2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp13Q5BKP2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp13Q5BKP2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp13Q5BKP2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp13Q5BKP2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp13Q5BKP2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.89■□□□□ 0.94
Usp13Q5BKP2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Usp13Q5BKP2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp13Q5BKP2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp13Q5BKP2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp13Q5BKP2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp13Q5BKP2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp13Q5BKP2 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.89■□□□□ 0.93
Usp13Q5BKP2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp13Q5BKP2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp13Q5BKP2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp13Q5BKP2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp13Q5BKP2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp13Q5BKP2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp13Q5BKP2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp13Q5BKP2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp13Q5BKP2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp13Q5BKP2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Usp13Q5BKP2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp13Q5BKP2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms