Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg11Q3UHA3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg11Q3UHA3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg11Q3UHA3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg11Q3UHA3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg11Q3UHA3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Spg11Q3UHA3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Spg11Q3UHA3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg11Q3UHA3 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.28■□□□□ 0.36
Spg11Q3UHA3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.28■□□□□ 0.36
Spg11Q3UHA3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.28■□□□□ 0.36
Spg11Q3UHA3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.28■□□□□ 0.36
Spg11Q3UHA3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Spg11Q3UHA3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Spg11Q3UHA3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Spg11Q3UHA3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.27■□□□□ 0.36
Spg11Q3UHA3 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.27■□□□□ 0.36
Spg11Q3UHA3 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.27■□□□□ 0.36
Spg11Q3UHA3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Spg11Q3UHA3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.27■□□□□ 0.36
Spg11Q3UHA3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Spg11Q3UHA3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.27■□□□□ 0.35
Spg11Q3UHA3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Spg11Q3UHA3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Spg11Q3UHA3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Spg11Q3UHA3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Spg11Q3UHA3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Spg11Q3UHA3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Spg11Q3UHA3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.26■□□□□ 0.35
Spg11Q3UHA3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Spg11Q3UHA3 Gm29518-201ENSMUST00000190858 372 ntBASIC17.26■□□□□ 0.35
Spg11Q3UHA3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.26■□□□□ 0.35
Spg11Q3UHA3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Spg11Q3UHA3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Spg11Q3UHA3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Spg11Q3UHA3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Spg11Q3UHA3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Spg11Q3UHA3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Spg11Q3UHA3 Mir5130-201ENSMUST00000175160 84 ntBASIC17.26■□□□□ 0.35
Spg11Q3UHA3 Gm27463-201ENSMUST00000183569 57 ntBASIC17.26■□□□□ 0.35
Spg11Q3UHA3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.25■□□□□ 0.35
Spg11Q3UHA3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Spg11Q3UHA3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.25■□□□□ 0.35
Spg11Q3UHA3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Spg11Q3UHA3 Gm10138-203ENSMUST00000206952 366 ntBASIC17.25■□□□□ 0.35
Spg11Q3UHA3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Spg11Q3UHA3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Spg11Q3UHA3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Spg11Q3UHA3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Spg11Q3UHA3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Spg11Q3UHA3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Spg11Q3UHA3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Spg11Q3UHA3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.25■□□□□ 0.35
Spg11Q3UHA3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Spg11Q3UHA3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Spg11Q3UHA3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Spg11Q3UHA3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Spg11Q3UHA3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Spg11Q3UHA3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Spg11Q3UHA3 Gm2274-201ENSMUST00000184539 609 ntBASIC17.24■□□□□ 0.35
Spg11Q3UHA3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.24■□□□□ 0.35
Spg11Q3UHA3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Spg11Q3UHA3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Spg11Q3UHA3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Spg11Q3UHA3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.24■□□□□ 0.35
Spg11Q3UHA3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Spg11Q3UHA3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Spg11Q3UHA3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Spg11Q3UHA3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Spg11Q3UHA3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Spg11Q3UHA3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Spg11Q3UHA3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Spg11Q3UHA3 Gm8587-201ENSMUST00000076538 843 ntBASIC17.23■□□□□ 0.35
Spg11Q3UHA3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Spg11Q3UHA3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Spg11Q3UHA3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.23■□□□□ 0.35
Spg11Q3UHA3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Spg11Q3UHA3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Spg11Q3UHA3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Spg11Q3UHA3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.22■□□□□ 0.35
Spg11Q3UHA3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Spg11Q3UHA3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Spg11Q3UHA3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.22■□□□□ 0.35
Spg11Q3UHA3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Spg11Q3UHA3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Spg11Q3UHA3 Gm9013-201ENSMUST00000132939 882 ntBASIC17.22■□□□□ 0.35
Spg11Q3UHA3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Spg11Q3UHA3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Spg11Q3UHA3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Spg11Q3UHA3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Spg11Q3UHA3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Spg11Q3UHA3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Spg11Q3UHA3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Spg11Q3UHA3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Spg11Q3UHA3 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.21■□□□□ 0.35
Spg11Q3UHA3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Spg11Q3UHA3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Spg11Q3UHA3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Spg11Q3UHA3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Spg11Q3UHA3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms