Protein–RNA interactions for Protein: P97784

Cry1, Cryptochrome-1, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cry1P97784 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cry1P97784 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cry1P97784 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Cry1P97784 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.7■□□□□ 0.58
Cry1P97784 Gm44549-201ENSMUST00000208351 577 ntBASIC18.7■□□□□ 0.58
Cry1P97784 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cry1P97784 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cry1P97784 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cry1P97784 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cry1P97784 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cry1P97784 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cry1P97784 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cry1P97784 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cry1P97784 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cry1P97784 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cry1P97784 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cry1P97784 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cry1P97784 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cry1P97784 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cry1P97784 Gm6576-201ENSMUST00000169678 883 ntBASIC18.69■□□□□ 0.58
Cry1P97784 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.69■□□□□ 0.58
Cry1P97784 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cry1P97784 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.69■□□□□ 0.58
Cry1P97784 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cry1P97784 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cry1P97784 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.68■□□□□ 0.58
Cry1P97784 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.68■□□□□ 0.58
Cry1P97784 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cry1P97784 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.68■□□□□ 0.58
Cry1P97784 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cry1P97784 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cry1P97784 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cry1P97784 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cry1P97784 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cry1P97784 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cry1P97784 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cry1P97784 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cry1P97784 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cry1P97784 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.67■□□□□ 0.58
Cry1P97784 Gm22325-201ENSMUST00000158904 308 ntBASIC18.67■□□□□ 0.58
Cry1P97784 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cry1P97784 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.67■□□□□ 0.58
Cry1P97784 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cry1P97784 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cry1P97784 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cry1P97784 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cry1P97784 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cry1P97784 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cry1P97784 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cry1P97784 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cry1P97784 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cry1P97784 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cry1P97784 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cry1P97784 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cry1P97784 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.66■□□□□ 0.58
Cry1P97784 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.66■□□□□ 0.58
Cry1P97784 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.66■□□□□ 0.58
Cry1P97784 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cry1P97784 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Cry1P97784 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cry1P97784 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cry1P97784 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cry1P97784 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cry1P97784 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cry1P97784 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cry1P97784 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cry1P97784 Gm11249-201ENSMUST00000117071 859 ntBASIC18.65■□□□□ 0.58
Cry1P97784 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Cry1P97784 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cry1P97784 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.65■□□□□ 0.58
Cry1P97784 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cry1P97784 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cry1P97784 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.65■□□□□ 0.58
Cry1P97784 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cry1P97784 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cry1P97784 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cry1P97784 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cry1P97784 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cry1P97784 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Cry1P97784 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cry1P97784 Gm18666-201ENSMUST00000190039 958 ntBASIC18.64■□□□□ 0.57
Cry1P97784 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cry1P97784 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cry1P97784 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cry1P97784 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cry1P97784 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cry1P97784 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.63■□□□□ 0.57
Cry1P97784 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cry1P97784 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cry1P97784 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cry1P97784 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.63■□□□□ 0.57
Cry1P97784 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.63■□□□□ 0.57
Cry1P97784 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.63■□□□□ 0.57
Cry1P97784 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cry1P97784 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
Cry1P97784 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Cry1P97784 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.63■□□□□ 0.57
Cry1P97784 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.63■□□□□ 0.57
Cry1P97784 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cry1P97784 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms