Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SmoP56726 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SmoP56726 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.74■□□□□ 0.59
SmoP56726 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.74■□□□□ 0.59
SmoP56726 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SmoP56726 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SmoP56726 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.74■□□□□ 0.59
SmoP56726 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SmoP56726 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SmoP56726 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SmoP56726 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SmoP56726 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SmoP56726 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SmoP56726 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SmoP56726 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.73■□□□□ 0.59
SmoP56726 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SmoP56726 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SmoP56726 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SmoP56726 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.73■□□□□ 0.59
SmoP56726 Gm12527-201ENSMUST00000117967 564 ntBASIC18.73■□□□□ 0.59
SmoP56726 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.73■□□□□ 0.59
SmoP56726 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.73■□□□□ 0.59
SmoP56726 Gm27011-201ENSMUST00000182352 972 ntBASIC18.73■□□□□ 0.59
SmoP56726 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.73■□□□□ 0.59
SmoP56726 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SmoP56726 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.73■□□□□ 0.59
SmoP56726 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SmoP56726 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.73■□□□□ 0.59
SmoP56726 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SmoP56726 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.73■□□□□ 0.59
SmoP56726 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SmoP56726 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SmoP56726 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SmoP56726 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SmoP56726 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SmoP56726 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SmoP56726 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SmoP56726 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SmoP56726 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SmoP56726 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SmoP56726 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SmoP56726 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SmoP56726 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SmoP56726 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SmoP56726 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SmoP56726 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.71■□□□□ 0.59
SmoP56726 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SmoP56726 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SmoP56726 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SmoP56726 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SmoP56726 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SmoP56726 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SmoP56726 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SmoP56726 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SmoP56726 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SmoP56726 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SmoP56726 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SmoP56726 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SmoP56726 Gm20049-201ENSMUST00000219950 730 ntBASIC18.7■□□□□ 0.58
SmoP56726 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SmoP56726 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SmoP56726 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SmoP56726 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SmoP56726 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SmoP56726 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SmoP56726 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.69■□□□□ 0.58
SmoP56726 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.69■□□□□ 0.58
SmoP56726 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SmoP56726 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SmoP56726 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.69■□□□□ 0.58
SmoP56726 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SmoP56726 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SmoP56726 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SmoP56726 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SmoP56726 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SmoP56726 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SmoP56726 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SmoP56726 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SmoP56726 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SmoP56726 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SmoP56726 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SmoP56726 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SmoP56726 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.68■□□□□ 0.58
SmoP56726 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SmoP56726 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SmoP56726 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SmoP56726 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SmoP56726 BC021767-201ENSMUST00000126387 1716 ntBASIC18.68■□□□□ 0.58
SmoP56726 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SmoP56726 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.67■□□□□ 0.58
SmoP56726 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
SmoP56726 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SmoP56726 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SmoP56726 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SmoP56726 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SmoP56726 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SmoP56726 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SmoP56726 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SmoP56726 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SmoP56726 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms