Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdkn2bP55271 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cdkn2bP55271 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.83■□□□□ 0.44
Cdkn2bP55271 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdkn2bP55271 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdkn2bP55271 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdkn2bP55271 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdkn2bP55271 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdkn2bP55271 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
Cdkn2bP55271 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdkn2bP55271 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Cdkn2bP55271 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cdkn2bP55271 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdkn2bP55271 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.82■□□□□ 0.44
Cdkn2bP55271 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.82■□□□□ 0.44
Cdkn2bP55271 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdkn2bP55271 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdkn2bP55271 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdkn2bP55271 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdkn2bP55271 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.82■□□□□ 0.44
Cdkn2bP55271 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdkn2bP55271 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdkn2bP55271 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdkn2bP55271 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdkn2bP55271 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdkn2bP55271 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cdkn2bP55271 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdkn2bP55271 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdkn2bP55271 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Cdkn2bP55271 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdkn2bP55271 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdkn2bP55271 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdkn2bP55271 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.81■□□□□ 0.44
Cdkn2bP55271 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cdkn2bP55271 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdkn2bP55271 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdkn2bP55271 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.8■□□□□ 0.44
Cdkn2bP55271 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdkn2bP55271 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdkn2bP55271 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdkn2bP55271 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Cdkn2bP55271 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdkn2bP55271 Gm13241-201ENSMUST00000094493 780 ntBASIC17.8■□□□□ 0.44
Cdkn2bP55271 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdkn2bP55271 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdkn2bP55271 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdkn2bP55271 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cdkn2bP55271 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdkn2bP55271 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.79■□□□□ 0.44
Cdkn2bP55271 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cdkn2bP55271 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Cdkn2bP55271 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdkn2bP55271 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Cdkn2bP55271 Gm8493-201ENSMUST00000196881 489 ntBASIC17.79■□□□□ 0.44
Cdkn2bP55271 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdkn2bP55271 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdkn2bP55271 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.79■□□□□ 0.44
Cdkn2bP55271 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdkn2bP55271 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdkn2bP55271 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cdkn2bP55271 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdkn2bP55271 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.79■□□□□ 0.44
Cdkn2bP55271 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdkn2bP55271 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdkn2bP55271 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.79■□□□□ 0.44
Cdkn2bP55271 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdkn2bP55271 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cdkn2bP55271 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdkn2bP55271 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdkn2bP55271 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdkn2bP55271 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cdkn2bP55271 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cdkn2bP55271 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cdkn2bP55271 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdkn2bP55271 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
Cdkn2bP55271 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdkn2bP55271 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdkn2bP55271 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Cdkn2bP55271 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Cdkn2bP55271 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Cdkn2bP55271 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdkn2bP55271 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdkn2bP55271 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.77■□□□□ 0.44
Cdkn2bP55271 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.77■□□□□ 0.44
Cdkn2bP55271 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cdkn2bP55271 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdkn2bP55271 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cdkn2bP55271 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cdkn2bP55271 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdkn2bP55271 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cdkn2bP55271 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdkn2bP55271 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cdkn2bP55271 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
Cdkn2bP55271 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdkn2bP55271 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdkn2bP55271 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdkn2bP55271 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.76■□□□□ 0.43
Cdkn2bP55271 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdkn2bP55271 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cdkn2bP55271 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms