Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx2P48379 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx2P48379 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx2P48379 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx2P48379 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Rfx2P48379 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx2P48379 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx2P48379 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx2P48379 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.44■□□□□ 0.7
Rfx2P48379 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx2P48379 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.44■□□□□ 0.7
Rfx2P48379 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx2P48379 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx2P48379 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Rfx2P48379 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.44■□□□□ 0.7
Rfx2P48379 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Rfx2P48379 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.44■□□□□ 0.7
Rfx2P48379 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx2P48379 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rfx2P48379 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx2P48379 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx2P48379 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx2P48379 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx2P48379 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx2P48379 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx2P48379 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx2P48379 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.43■□□□□ 0.7
Rfx2P48379 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx2P48379 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Rfx2P48379 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Rfx2P48379 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Rfx2P48379 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx2P48379 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx2P48379 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx2P48379 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx2P48379 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx2P48379 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx2P48379 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.43■□□□□ 0.7
Rfx2P48379 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.42■□□□□ 0.7
Rfx2P48379 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx2P48379 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx2P48379 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rfx2P48379 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx2P48379 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx2P48379 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx2P48379 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx2P48379 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
Rfx2P48379 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Rfx2P48379 Gm20760-201ENSMUST00000179197 648 ntBASIC19.42■□□□□ 0.7
Rfx2P48379 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx2P48379 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx2P48379 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx2P48379 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.42■□□□□ 0.7
Rfx2P48379 BC021767-201ENSMUST00000126387 1716 ntBASIC19.42■□□□□ 0.7
Rfx2P48379 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx2P48379 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx2P48379 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx2P48379 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx2P48379 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rfx2P48379 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx2P48379 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx2P48379 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx2P48379 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.41■□□□□ 0.7
Rfx2P48379 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Rfx2P48379 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.41■□□□□ 0.7
Rfx2P48379 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.41■□□□□ 0.7
Rfx2P48379 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx2P48379 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx2P48379 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx2P48379 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx2P48379 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx2P48379 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx2P48379 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Rfx2P48379 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx2P48379 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.4■□□□□ 0.7
Rfx2P48379 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.4■□□□□ 0.7
Rfx2P48379 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.4■□□□□ 0.7
Rfx2P48379 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.4■□□□□ 0.7
Rfx2P48379 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.4■□□□□ 0.7
Rfx2P48379 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx2P48379 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.4■□□□□ 0.7
Rfx2P48379 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.39■□□□□ 0.7
Rfx2P48379 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rfx2P48379 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rfx2P48379 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx2P48379 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Rfx2P48379 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx2P48379 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rfx2P48379 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.39■□□□□ 0.69
Rfx2P48379 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Rfx2P48379 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx2P48379 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Rfx2P48379 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx2P48379 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx2P48379 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx2P48379 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.39■□□□□ 0.69
Rfx2P48379 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx2P48379 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.39■□□□□ 0.69
Rfx2P48379 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rfx2P48379 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms