Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LdlrP35951 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LdlrP35951 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LdlrP35951 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LdlrP35951 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LdlrP35951 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LdlrP35951 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LdlrP35951 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LdlrP35951 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LdlrP35951 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LdlrP35951 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LdlrP35951 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LdlrP35951 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.48■□□□□ 0.55
LdlrP35951 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LdlrP35951 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LdlrP35951 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
LdlrP35951 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LdlrP35951 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LdlrP35951 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.48■□□□□ 0.55
LdlrP35951 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LdlrP35951 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LdlrP35951 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LdlrP35951 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LdlrP35951 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LdlrP35951 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LdlrP35951 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LdlrP35951 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LdlrP35951 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.47■□□□□ 0.55
LdlrP35951 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LdlrP35951 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LdlrP35951 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.47■□□□□ 0.55
LdlrP35951 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LdlrP35951 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LdlrP35951 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.47■□□□□ 0.55
LdlrP35951 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.47■□□□□ 0.55
LdlrP35951 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LdlrP35951 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LdlrP35951 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LdlrP35951 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LdlrP35951 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LdlrP35951 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LdlrP35951 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LdlrP35951 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LdlrP35951 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LdlrP35951 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LdlrP35951 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
LdlrP35951 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LdlrP35951 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.46■□□□□ 0.55
LdlrP35951 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LdlrP35951 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LdlrP35951 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LdlrP35951 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LdlrP35951 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LdlrP35951 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LdlrP35951 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LdlrP35951 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LdlrP35951 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
LdlrP35951 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LdlrP35951 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LdlrP35951 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LdlrP35951 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LdlrP35951 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.45■□□□□ 0.54
LdlrP35951 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.45■□□□□ 0.54
LdlrP35951 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LdlrP35951 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LdlrP35951 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.44■□□□□ 0.54
LdlrP35951 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LdlrP35951 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LdlrP35951 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LdlrP35951 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.44■□□□□ 0.54
LdlrP35951 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LdlrP35951 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LdlrP35951 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LdlrP35951 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
LdlrP35951 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LdlrP35951 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.43■□□□□ 0.54
LdlrP35951 Gm27011-201ENSMUST00000182352 972 ntBASIC18.43■□□□□ 0.54
LdlrP35951 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.43■□□□□ 0.54
LdlrP35951 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.43■□□□□ 0.54
LdlrP35951 Gm40848-201ENSMUST00000221998 324 ntBASIC18.43■□□□□ 0.54
LdlrP35951 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LdlrP35951 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LdlrP35951 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LdlrP35951 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
LdlrP35951 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LdlrP35951 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LdlrP35951 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LdlrP35951 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LdlrP35951 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LdlrP35951 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LdlrP35951 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LdlrP35951 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LdlrP35951 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LdlrP35951 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.42■□□□□ 0.54
LdlrP35951 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LdlrP35951 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.42■□□□□ 0.54
LdlrP35951 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LdlrP35951 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LdlrP35951 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LdlrP35951 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms