Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Mmp13P33435 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Mmp13P33435 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
Mmp13P33435 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp13P33435 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Mmp13P33435 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp13P33435 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp13P33435 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp13P33435 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Mmp13P33435 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp13P33435 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Mmp13P33435 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp13P33435 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp13P33435 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp13P33435 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp13P33435 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp13P33435 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp13P33435 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19■□□□□ 0.63
Mmp13P33435 Gm43182-201ENSMUST00000199476 2528 ntBASIC19■□□□□ 0.63
Mmp13P33435 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19■□□□□ 0.63
Mmp13P33435 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp13P33435 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Mmp13P33435 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19■□□□□ 0.63
Mmp13P33435 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp13P33435 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp13P33435 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp13P33435 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp13P33435 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp13P33435 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp13P33435 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.99■□□□□ 0.63
Mmp13P33435 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Mmp13P33435 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.99■□□□□ 0.63
Mmp13P33435 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp13P33435 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp13P33435 Gm10493-201ENSMUST00000097270 612 ntBASIC18.99■□□□□ 0.63
Mmp13P33435 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp13P33435 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp13P33435 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp13P33435 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp13P33435 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp13P33435 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Mmp13P33435 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp13P33435 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp13P33435 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp13P33435 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp13P33435 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.98■□□□□ 0.63
Mmp13P33435 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp13P33435 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp13P33435 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp13P33435 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp13P33435 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.98■□□□□ 0.63
Mmp13P33435 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp13P33435 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp13P33435 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp13P33435 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp13P33435 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp13P33435 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp13P33435 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.97■□□□□ 0.63
Mmp13P33435 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.97■□□□□ 0.63
Mmp13P33435 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp13P33435 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp13P33435 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp13P33435 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp13P33435 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp13P33435 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp13P33435 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.97■□□□□ 0.63
Mmp13P33435 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp13P33435 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp13P33435 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp13P33435 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp13P33435 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp13P33435 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.96■□□□□ 0.63
Mmp13P33435 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.96■□□□□ 0.63
Mmp13P33435 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.96■□□□□ 0.63
Mmp13P33435 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.96■□□□□ 0.63
Mmp13P33435 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.96■□□□□ 0.63
Mmp13P33435 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp13P33435 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp13P33435 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp13P33435 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp13P33435 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp13P33435 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp13P33435 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp13P33435 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp13P33435 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp13P33435 Gm27801-201ENSMUST00000184174 223 ntBASIC18.95■□□□□ 0.62
Mmp13P33435 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp13P33435 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp13P33435 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp13P33435 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp13P33435 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp13P33435 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp13P33435 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp13P33435 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp13P33435 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp13P33435 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.94■□□□□ 0.62
Mmp13P33435 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp13P33435 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.94■□□□□ 0.62
Mmp13P33435 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.94■□□□□ 0.62
Mmp13P33435 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms