Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Flg-201ENSMUST00000050758 1488 ntBASIC21.52■■□□□ 1.04
Vcam1P29533 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vcam1P29533 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Vcam1P29533 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vcam1P29533 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.52■■□□□ 1.04
Vcam1P29533 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.52■■□□□ 1.04
Vcam1P29533 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Vcam1P29533 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vcam1P29533 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.52■■□□□ 1.04
Vcam1P29533 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vcam1P29533 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vcam1P29533 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.04
Vcam1P29533 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Vcam1P29533 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Vcam1P29533 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Vcam1P29533 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vcam1P29533 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.51■■□□□ 1.03
Vcam1P29533 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vcam1P29533 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.51■■□□□ 1.03
Vcam1P29533 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
Vcam1P29533 Gm22325-201ENSMUST00000158904 308 ntBASIC21.51■■□□□ 1.03
Vcam1P29533 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Vcam1P29533 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Vcam1P29533 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.51■■□□□ 1.03
Vcam1P29533 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vcam1P29533 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vcam1P29533 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.51■■□□□ 1.03
Vcam1P29533 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vcam1P29533 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Vcam1P29533 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vcam1P29533 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vcam1P29533 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vcam1P29533 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.5■■□□□ 1.03
Vcam1P29533 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.5■■□□□ 1.03
Vcam1P29533 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.5■■□□□ 1.03
Vcam1P29533 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vcam1P29533 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vcam1P29533 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vcam1P29533 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vcam1P29533 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vcam1P29533 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.49■■□□□ 1.03
Vcam1P29533 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vcam1P29533 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vcam1P29533 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vcam1P29533 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.49■■□□□ 1.03
Vcam1P29533 Gm6576-201ENSMUST00000169678 883 ntBASIC21.49■■□□□ 1.03
Vcam1P29533 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.49■■□□□ 1.03
Vcam1P29533 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.49■■□□□ 1.03
Vcam1P29533 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Vcam1P29533 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Vcam1P29533 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Vcam1P29533 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vcam1P29533 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vcam1P29533 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vcam1P29533 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vcam1P29533 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vcam1P29533 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vcam1P29533 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.48■■□□□ 1.03
Vcam1P29533 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Vcam1P29533 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vcam1P29533 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Vcam1P29533 Gm15378-201ENSMUST00000121894 207 ntBASIC21.48■■□□□ 1.03
Vcam1P29533 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.48■■□□□ 1.03
Vcam1P29533 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Vcam1P29533 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.48■■□□□ 1.03
Vcam1P29533 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Vcam1P29533 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vcam1P29533 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vcam1P29533 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vcam1P29533 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Vcam1P29533 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vcam1P29533 Mir7071-201ENSMUST00000184847 69 ntBASIC21.47■■□□□ 1.03
Vcam1P29533 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.47■■□□□ 1.03
Vcam1P29533 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vcam1P29533 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Vcam1P29533 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Vcam1P29533 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Vcam1P29533 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vcam1P29533 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Vcam1P29533 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Vcam1P29533 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Vcam1P29533 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Vcam1P29533 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vcam1P29533 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Vcam1P29533 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vcam1P29533 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vcam1P29533 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Vcam1P29533 Gm715-201ENSMUST00000117865 831 ntBASIC21.46■■□□□ 1.03
Vcam1P29533 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vcam1P29533 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.46■■□□□ 1.03
Vcam1P29533 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vcam1P29533 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Vcam1P29533 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vcam1P29533 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Vcam1P29533 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Vcam1P29533 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vcam1P29533 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Vcam1P29533 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Vcam1P29533 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vcam1P29533 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms