Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.57■□□□□ 0.4
ApoeP08226 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ApoeP08226 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ApoeP08226 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ApoeP08226 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ApoeP08226 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ApoeP08226 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
ApoeP08226 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ApoeP08226 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.57■□□□□ 0.4
ApoeP08226 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ApoeP08226 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ApoeP08226 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ApoeP08226 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.56■□□□□ 0.4
ApoeP08226 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ApoeP08226 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
ApoeP08226 Gm15546-201ENSMUST00000122095 826 ntBASIC17.56■□□□□ 0.4
ApoeP08226 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.56■□□□□ 0.4
ApoeP08226 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
ApoeP08226 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.56■□□□□ 0.4
ApoeP08226 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.56■□□□□ 0.4
ApoeP08226 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.56■□□□□ 0.4
ApoeP08226 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ApoeP08226 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ApoeP08226 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ApoeP08226 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ApoeP08226 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ApoeP08226 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ApoeP08226 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ApoeP08226 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ApoeP08226 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ApoeP08226 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ApoeP08226 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ApoeP08226 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ApoeP08226 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ApoeP08226 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ApoeP08226 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ApoeP08226 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ApoeP08226 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ApoeP08226 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.55■□□□□ 0.4
ApoeP08226 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ApoeP08226 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ApoeP08226 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ApoeP08226 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ApoeP08226 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ApoeP08226 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ApoeP08226 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
ApoeP08226 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ApoeP08226 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ApoeP08226 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ApoeP08226 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ApoeP08226 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ApoeP08226 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ApoeP08226 Golgb1-201ENSMUST00000023534 498 ntBASIC17.54■□□□□ 0.4
ApoeP08226 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ApoeP08226 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ApoeP08226 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
ApoeP08226 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ApoeP08226 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ApoeP08226 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ApoeP08226 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ApoeP08226 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ApoeP08226 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ApoeP08226 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ApoeP08226 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ApoeP08226 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ApoeP08226 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ApoeP08226 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ApoeP08226 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ApoeP08226 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.53■□□□□ 0.4
ApoeP08226 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ApoeP08226 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ApoeP08226 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.53■□□□□ 0.4
ApoeP08226 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ApoeP08226 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ApoeP08226 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ApoeP08226 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ApoeP08226 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
ApoeP08226 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
ApoeP08226 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ApoeP08226 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ApoeP08226 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ApoeP08226 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ApoeP08226 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ApoeP08226 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
ApoeP08226 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ApoeP08226 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ApoeP08226 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.52■□□□□ 0.39
ApoeP08226 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ApoeP08226 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
ApoeP08226 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ApoeP08226 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
ApoeP08226 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ApoeP08226 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ApoeP08226 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ApoeP08226 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ApoeP08226 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ApoeP08226 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ApoeP08226 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ApoeP08226 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ApoeP08226 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms