Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TnfP06804 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TnfP06804 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TnfP06804 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.78■□□□□ 0.76
TnfP06804 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TnfP06804 Gm2559-201ENSMUST00000201323 363 ntBASIC19.78■□□□□ 0.76
TnfP06804 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TnfP06804 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
TnfP06804 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TnfP06804 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TnfP06804 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TnfP06804 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TnfP06804 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TnfP06804 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TnfP06804 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TnfP06804 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TnfP06804 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TnfP06804 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
TnfP06804 Gm13168-201ENSMUST00000121771 632 ntBASIC19.77■□□□□ 0.76
TnfP06804 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TnfP06804 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.77■□□□□ 0.76
TnfP06804 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TnfP06804 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TnfP06804 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TnfP06804 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TnfP06804 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TnfP06804 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TnfP06804 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.77■□□□□ 0.75
TnfP06804 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.77■□□□□ 0.75
TnfP06804 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TnfP06804 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TnfP06804 Gm27275-201ENSMUST00000184318 272 ntBASIC19.76■□□□□ 0.75
TnfP06804 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.76■□□□□ 0.75
TnfP06804 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TnfP06804 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TnfP06804 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TnfP06804 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TnfP06804 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TnfP06804 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TnfP06804 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TnfP06804 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
TnfP06804 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TnfP06804 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TnfP06804 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TnfP06804 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TnfP06804 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TnfP06804 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TnfP06804 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TnfP06804 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TnfP06804 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TnfP06804 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TnfP06804 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TnfP06804 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TnfP06804 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TnfP06804 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TnfP06804 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TnfP06804 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TnfP06804 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TnfP06804 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TnfP06804 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.73■□□□□ 0.75
TnfP06804 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TnfP06804 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TnfP06804 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TnfP06804 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TnfP06804 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.73■□□□□ 0.75
TnfP06804 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TnfP06804 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TnfP06804 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.73■□□□□ 0.75
TnfP06804 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TnfP06804 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.73■□□□□ 0.75
TnfP06804 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TnfP06804 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TnfP06804 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TnfP06804 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TnfP06804 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TnfP06804 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TnfP06804 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TnfP06804 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TnfP06804 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TnfP06804 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TnfP06804 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TnfP06804 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.72■□□□□ 0.75
TnfP06804 Dio3-201ENSMUST00000097228 1449 ntBASIC19.72■□□□□ 0.75
TnfP06804 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TnfP06804 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.72■□□□□ 0.75
TnfP06804 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TnfP06804 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TnfP06804 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TnfP06804 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TnfP06804 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TnfP06804 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TnfP06804 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TnfP06804 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TnfP06804 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.7■□□□□ 0.74
TnfP06804 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TnfP06804 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TnfP06804 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.7■□□□□ 0.74
TnfP06804 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.7■□□□□ 0.74
TnfP06804 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.7■□□□□ 0.74
TnfP06804 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms