Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Rpl35aO55142 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl35aO55142 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rpl35aO55142 Gm10602-201ENSMUST00000098239 609 ntBASIC13.83□□□□□ -0.2
Rpl35aO55142 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Rpl35aO55142 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl35aO55142 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl35aO55142 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rpl35aO55142 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl35aO55142 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Rpl35aO55142 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rpl35aO55142 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl35aO55142 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl35aO55142 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl35aO55142 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl35aO55142 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl35aO55142 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl35aO55142 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl35aO55142 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl35aO55142 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rpl35aO55142 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl35aO55142 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl35aO55142 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl35aO55142 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl35aO55142 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl35aO55142 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl35aO55142 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl35aO55142 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
Rpl35aO55142 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.82□□□□□ -0.2
Rpl35aO55142 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Rpl35aO55142 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.82□□□□□ -0.2
Rpl35aO55142 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rpl35aO55142 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl35aO55142 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl35aO55142 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl35aO55142 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl35aO55142 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rpl35aO55142 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl35aO55142 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl35aO55142 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl35aO55142 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl35aO55142 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rpl35aO55142 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl35aO55142 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl35aO55142 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl35aO55142 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl35aO55142 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl35aO55142 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl35aO55142 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl35aO55142 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rpl35aO55142 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl35aO55142 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rpl35aO55142 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl35aO55142 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl35aO55142 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC13.81□□□□□ -0.2
Rpl35aO55142 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl35aO55142 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.81□□□□□ -0.2
Rpl35aO55142 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.81□□□□□ -0.2
Rpl35aO55142 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC13.81□□□□□ -0.2
Rpl35aO55142 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl35aO55142 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rpl35aO55142 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl35aO55142 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl35aO55142 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl35aO55142 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl35aO55142 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl35aO55142 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl35aO55142 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl35aO55142 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl35aO55142 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl35aO55142 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl35aO55142 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl35aO55142 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl35aO55142 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Rpl35aO55142 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.8□□□□□ -0.2
Rpl35aO55142 Gm13534-201ENSMUST00000121169 513 ntBASIC13.8□□□□□ -0.2
Rpl35aO55142 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl35aO55142 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rpl35aO55142 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl35aO55142 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl35aO55142 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl35aO55142 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpl35aO55142 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rpl35aO55142 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl35aO55142 Gm37352-201ENSMUST00000193908 2181 ntBASIC13.79□□□□□ -0.2
Rpl35aO55142 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl35aO55142 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl35aO55142 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl35aO55142 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Rpl35aO55142 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl35aO55142 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl35aO55142 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl35aO55142 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl35aO55142 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rpl35aO55142 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Rpl35aO55142 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl35aO55142 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl35aO55142 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl35aO55142 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rpl35aO55142 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms