Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.02■□□□□ 0.8
Nr1i3O35627 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nr1i3O35627 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nr1i3O35627 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.02■□□□□ 0.8
Nr1i3O35627 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.02■□□□□ 0.8
Nr1i3O35627 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.02■□□□□ 0.8
Nr1i3O35627 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nr1i3O35627 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nr1i3O35627 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Nr1i3O35627 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.02■□□□□ 0.79
Nr1i3O35627 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Nr1i3O35627 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nr1i3O35627 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nr1i3O35627 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.01■□□□□ 0.79
Nr1i3O35627 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Nr1i3O35627 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nr1i3O35627 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nr1i3O35627 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.01■□□□□ 0.79
Nr1i3O35627 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
Nr1i3O35627 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nr1i3O35627 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nr1i3O35627 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nr1i3O35627 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nr1i3O35627 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Nr1i3O35627 Fam105a-203ENSMUST00000226170 3043 ntBASIC20■□□□□ 0.79
Nr1i3O35627 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20■□□□□ 0.79
Nr1i3O35627 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nr1i3O35627 Gm13146-201ENSMUST00000118508 780 ntBASIC20■□□□□ 0.79
Nr1i3O35627 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Nr1i3O35627 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nr1i3O35627 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20■□□□□ 0.79
Nr1i3O35627 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Nr1i3O35627 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nr1i3O35627 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Nr1i3O35627 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nr1i3O35627 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nr1i3O35627 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nr1i3O35627 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nr1i3O35627 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20■□□□□ 0.79
Nr1i3O35627 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nr1i3O35627 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nr1i3O35627 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nr1i3O35627 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nr1i3O35627 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nr1i3O35627 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nr1i3O35627 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nr1i3O35627 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nr1i3O35627 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nr1i3O35627 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nr1i3O35627 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.99■□□□□ 0.79
Nr1i3O35627 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nr1i3O35627 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Nr1i3O35627 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.98■□□□□ 0.79
Nr1i3O35627 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.98■□□□□ 0.79
Nr1i3O35627 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.98■□□□□ 0.79
Nr1i3O35627 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Nr1i3O35627 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Nr1i3O35627 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nr1i3O35627 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nr1i3O35627 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nr1i3O35627 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nr1i3O35627 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nr1i3O35627 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nr1i3O35627 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nr1i3O35627 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1i3O35627 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.97■□□□□ 0.79
Nr1i3O35627 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1i3O35627 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1i3O35627 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1i3O35627 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1i3O35627 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.97■□□□□ 0.79
Nr1i3O35627 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1i3O35627 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.97■□□□□ 0.79
Nr1i3O35627 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Nr1i3O35627 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Nr1i3O35627 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1i3O35627 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1i3O35627 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nr1i3O35627 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nr1i3O35627 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nr1i3O35627 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nr1i3O35627 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nr1i3O35627 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.96■□□□□ 0.79
Nr1i3O35627 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.96■□□□□ 0.79
Nr1i3O35627 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nr1i3O35627 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Nr1i3O35627 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Nr1i3O35627 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nr1i3O35627 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nr1i3O35627 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nr1i3O35627 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nr1i3O35627 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1i3O35627 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1i3O35627 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1i3O35627 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Nr1i3O35627 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.95■□□□□ 0.78
Nr1i3O35627 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.95■□□□□ 0.78
Nr1i3O35627 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1i3O35627 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1i3O35627 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms