Protein–RNA interactions for Protein: O35324

Sh2d1b, SH2 domain-containing protein 1B, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1bO35324 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2d1bO35324 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.36■□□□□ 0.37
Sh2d1bO35324 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2d1bO35324 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2d1bO35324 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2d1bO35324 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2d1bO35324 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Sh2d1bO35324 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Sh2d1bO35324 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d1bO35324 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d1bO35324 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d1bO35324 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Sh2d1bO35324 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Sh2d1bO35324 Gm15378-201ENSMUST00000121894 207 ntBASIC17.35■□□□□ 0.37
Sh2d1bO35324 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Sh2d1bO35324 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d1bO35324 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d1bO35324 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d1bO35324 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d1bO35324 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d1bO35324 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.35■□□□□ 0.37
Sh2d1bO35324 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d1bO35324 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sh2d1bO35324 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Sh2d1bO35324 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Sh2d1bO35324 Gm11927-201ENSMUST00000118472 759 ntBASIC17.34■□□□□ 0.37
Sh2d1bO35324 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sh2d1bO35324 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.34■□□□□ 0.37
Sh2d1bO35324 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d1bO35324 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.34■□□□□ 0.37
Sh2d1bO35324 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.34■□□□□ 0.37
Sh2d1bO35324 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d1bO35324 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d1bO35324 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d1bO35324 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sh2d1bO35324 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d1bO35324 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d1bO35324 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh2d1bO35324 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Sh2d1bO35324 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh2d1bO35324 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Sh2d1bO35324 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh2d1bO35324 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2d1bO35324 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2d1bO35324 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2d1bO35324 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2d1bO35324 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2d1bO35324 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.32■□□□□ 0.36
Sh2d1bO35324 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d1bO35324 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d1bO35324 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d1bO35324 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Sh2d1bO35324 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d1bO35324 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d1bO35324 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d1bO35324 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.32■□□□□ 0.36
Sh2d1bO35324 Zfp783-201ENSMUST00000095946 670 ntBASIC17.32■□□□□ 0.36
Sh2d1bO35324 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
Sh2d1bO35324 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d1bO35324 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d1bO35324 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d1bO35324 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d1bO35324 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d1bO35324 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sh2d1bO35324 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d1bO35324 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.31■□□□□ 0.36
Sh2d1bO35324 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.31■□□□□ 0.36
Sh2d1bO35324 Gm10252-201ENSMUST00000209541 832 ntBASIC17.31■□□□□ 0.36
Sh2d1bO35324 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.31■□□□□ 0.36
Sh2d1bO35324 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d1bO35324 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d1bO35324 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d1bO35324 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d1bO35324 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.31■□□□□ 0.36
Sh2d1bO35324 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sh2d1bO35324 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d1bO35324 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d1bO35324 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d1bO35324 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.3■□□□□ 0.36
Sh2d1bO35324 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d1bO35324 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d1bO35324 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.3■□□□□ 0.36
Sh2d1bO35324 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d1bO35324 Gm6576-201ENSMUST00000169678 883 ntBASIC17.3■□□□□ 0.36
Sh2d1bO35324 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.3■□□□□ 0.36
Sh2d1bO35324 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.3■□□□□ 0.36
Sh2d1bO35324 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Sh2d1bO35324 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d1bO35324 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d1bO35324 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d1bO35324 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d1bO35324 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d1bO35324 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d1bO35324 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d1bO35324 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d1bO35324 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d1bO35324 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.29■□□□□ 0.36
Sh2d1bO35324 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Sh2d1bO35324 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.29■□□□□ 0.36
Sh2d1bO35324 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms