Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.69■□□□□ 0.42
Sh3yl1O08641 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3yl1O08641 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.69■□□□□ 0.42
Sh3yl1O08641 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3yl1O08641 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3yl1O08641 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Sh3yl1O08641 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3yl1O08641 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Sh3yl1O08641 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3yl1O08641 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3yl1O08641 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3yl1O08641 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Sh3yl1O08641 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Sh3yl1O08641 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3yl1O08641 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.68■□□□□ 0.42
Sh3yl1O08641 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3yl1O08641 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3yl1O08641 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3yl1O08641 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3yl1O08641 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.67■□□□□ 0.42
Sh3yl1O08641 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.67■□□□□ 0.42
Sh3yl1O08641 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3yl1O08641 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3yl1O08641 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3yl1O08641 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3yl1O08641 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.67■□□□□ 0.42
Sh3yl1O08641 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3yl1O08641 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3yl1O08641 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3yl1O08641 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.66■□□□□ 0.42
Sh3yl1O08641 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3yl1O08641 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3yl1O08641 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.66■□□□□ 0.42
Sh3yl1O08641 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.66■□□□□ 0.42
Sh3yl1O08641 Gm37179-201ENSMUST00000194862 823 ntBASIC17.66■□□□□ 0.42
Sh3yl1O08641 Gm7514-201ENSMUST00000209475 934 ntBASIC17.66■□□□□ 0.42
Sh3yl1O08641 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3yl1O08641 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3yl1O08641 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.66■□□□□ 0.42
Sh3yl1O08641 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3yl1O08641 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Sh3yl1O08641 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3yl1O08641 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3yl1O08641 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3yl1O08641 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3yl1O08641 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.65■□□□□ 0.42
Sh3yl1O08641 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3yl1O08641 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3yl1O08641 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.65■□□□□ 0.42
Sh3yl1O08641 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.65■□□□□ 0.42
Sh3yl1O08641 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3yl1O08641 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3yl1O08641 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3yl1O08641 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3yl1O08641 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3yl1O08641 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.65■□□□□ 0.42
Sh3yl1O08641 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3yl1O08641 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3yl1O08641 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3yl1O08641 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Sh3yl1O08641 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3yl1O08641 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.64■□□□□ 0.41
Sh3yl1O08641 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3yl1O08641 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3yl1O08641 Gm13146-201ENSMUST00000118508 780 ntBASIC17.64■□□□□ 0.41
Sh3yl1O08641 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Sh3yl1O08641 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3yl1O08641 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.64■□□□□ 0.41
Sh3yl1O08641 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3yl1O08641 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3yl1O08641 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3yl1O08641 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3yl1O08641 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3yl1O08641 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3yl1O08641 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Sh3yl1O08641 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3yl1O08641 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3yl1O08641 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Sh3yl1O08641 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3yl1O08641 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3yl1O08641 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3yl1O08641 Gm29257-201ENSMUST00000186115 639 ntBASIC17.63■□□□□ 0.41
Sh3yl1O08641 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3yl1O08641 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3yl1O08641 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3yl1O08641 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3yl1O08641 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3yl1O08641 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3yl1O08641 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3yl1O08641 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3yl1O08641 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3yl1O08641 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3yl1O08641 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3yl1O08641 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3yl1O08641 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3yl1O08641 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3yl1O08641 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.61■□□□□ 0.41
Sh3yl1O08641 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3yl1O08641 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3yl1O08641 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms