Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Shisa8J3QNX5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shisa8J3QNX5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shisa8J3QNX5 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shisa8J3QNX5 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shisa8J3QNX5 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shisa8J3QNX5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shisa8J3QNX5 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shisa8J3QNX5 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shisa8J3QNX5 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shisa8J3QNX5 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shisa8J3QNX5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Shisa8J3QNX5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shisa8J3QNX5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shisa8J3QNX5 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shisa8J3QNX5 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Shisa8J3QNX5 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shisa8J3QNX5 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.92■□□□□ 0.3
Shisa8J3QNX5 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Shisa8J3QNX5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.91■□□□□ 0.3
Shisa8J3QNX5 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa8J3QNX5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa8J3QNX5 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa8J3QNX5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa8J3QNX5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Shisa8J3QNX5 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa8J3QNX5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa8J3QNX5 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa8J3QNX5 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa8J3QNX5 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa8J3QNX5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.91■□□□□ 0.3
Shisa8J3QNX5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa8J3QNX5 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa8J3QNX5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa8J3QNX5 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa8J3QNX5 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa8J3QNX5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa8J3QNX5 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa8J3QNX5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.9■□□□□ 0.3
Shisa8J3QNX5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa8J3QNX5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Shisa8J3QNX5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.9■□□□□ 0.3
Shisa8J3QNX5 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.9■□□□□ 0.3
Shisa8J3QNX5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa8J3QNX5 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Shisa8J3QNX5 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa8J3QNX5 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa8J3QNX5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Shisa8J3QNX5 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
Shisa8J3QNX5 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Shisa8J3QNX5 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shisa8J3QNX5 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Shisa8J3QNX5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shisa8J3QNX5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shisa8J3QNX5 Golgb1-201ENSMUST00000023534 498 ntBASIC16.89■□□□□ 0.29
Shisa8J3QNX5 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Shisa8J3QNX5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.89■□□□□ 0.29
Shisa8J3QNX5 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shisa8J3QNX5 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shisa8J3QNX5 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shisa8J3QNX5 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Shisa8J3QNX5 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.89■□□□□ 0.29
Shisa8J3QNX5 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shisa8J3QNX5 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Shisa8J3QNX5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa8J3QNX5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa8J3QNX5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa8J3QNX5 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa8J3QNX5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Shisa8J3QNX5 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa8J3QNX5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.88■□□□□ 0.29
Shisa8J3QNX5 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa8J3QNX5 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa8J3QNX5 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa8J3QNX5 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Shisa8J3QNX5 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa8J3QNX5 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.88■□□□□ 0.29
Shisa8J3QNX5 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Shisa8J3QNX5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa8J3QNX5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa8J3QNX5 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Shisa8J3QNX5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shisa8J3QNX5 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shisa8J3QNX5 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shisa8J3QNX5 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Shisa8J3QNX5 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shisa8J3QNX5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shisa8J3QNX5 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shisa8J3QNX5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shisa8J3QNX5 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Shisa8J3QNX5 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Shisa8J3QNX5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shisa8J3QNX5 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shisa8J3QNX5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.86■□□□□ 0.29
Shisa8J3QNX5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shisa8J3QNX5 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shisa8J3QNX5 Gm14117-201ENSMUST00000122417 843 ntBASIC16.86■□□□□ 0.29
Shisa8J3QNX5 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.86■□□□□ 0.29
Shisa8J3QNX5 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.86■□□□□ 0.29
Shisa8J3QNX5 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms