Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh9F8VPK8 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.08■□□□□ 0.64
Pcdh9F8VPK8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh9F8VPK8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh9F8VPK8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Pcdh9F8VPK8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdh9F8VPK8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh9F8VPK8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh9F8VPK8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh9F8VPK8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh9F8VPK8 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.07■□□□□ 0.64
Pcdh9F8VPK8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh9F8VPK8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.07■□□□□ 0.64
Pcdh9F8VPK8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh9F8VPK8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh9F8VPK8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh9F8VPK8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh9F8VPK8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh9F8VPK8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh9F8VPK8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh9F8VPK8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh9F8VPK8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh9F8VPK8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh9F8VPK8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.06■□□□□ 0.64
Pcdh9F8VPK8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.06■□□□□ 0.64
Pcdh9F8VPK8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.06■□□□□ 0.64
Pcdh9F8VPK8 Gm38205-201ENSMUST00000192243 258 ntBASIC19.06■□□□□ 0.64
Pcdh9F8VPK8 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.06■□□□□ 0.64
Pcdh9F8VPK8 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.06■□□□□ 0.64
Pcdh9F8VPK8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh9F8VPK8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Pcdh9F8VPK8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh9F8VPK8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh9F8VPK8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh9F8VPK8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh9F8VPK8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Pcdh9F8VPK8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh9F8VPK8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Pcdh9F8VPK8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh9F8VPK8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh9F8VPK8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.05■□□□□ 0.64
Pcdh9F8VPK8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.05■□□□□ 0.64
Pcdh9F8VPK8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.05■□□□□ 0.64
Pcdh9F8VPK8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh9F8VPK8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh9F8VPK8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh9F8VPK8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh9F8VPK8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh9F8VPK8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh9F8VPK8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh9F8VPK8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh9F8VPK8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh9F8VPK8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Pcdh9F8VPK8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh9F8VPK8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh9F8VPK8 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.04■□□□□ 0.64
Pcdh9F8VPK8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh9F8VPK8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh9F8VPK8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh9F8VPK8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Pcdh9F8VPK8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh9F8VPK8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh9F8VPK8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Pcdh9F8VPK8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Pcdh9F8VPK8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh9F8VPK8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh9F8VPK8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh9F8VPK8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Pcdh9F8VPK8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.03■□□□□ 0.64
Pcdh9F8VPK8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh9F8VPK8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh9F8VPK8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Pcdh9F8VPK8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh9F8VPK8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh9F8VPK8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.03■□□□□ 0.64
Pcdh9F8VPK8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.03■□□□□ 0.64
Pcdh9F8VPK8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh9F8VPK8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Pcdh9F8VPK8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh9F8VPK8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh9F8VPK8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh9F8VPK8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh9F8VPK8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh9F8VPK8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh9F8VPK8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh9F8VPK8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh9F8VPK8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh9F8VPK8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh9F8VPK8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh9F8VPK8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh9F8VPK8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Pcdh9F8VPK8 Gm43060-201ENSMUST00000200621 289 ntBASIC19.02■□□□□ 0.64
Pcdh9F8VPK8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh9F8VPK8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.02■□□□□ 0.64
Pcdh9F8VPK8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdh9F8VPK8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Pcdh9F8VPK8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh9F8VPK8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh9F8VPK8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh9F8VPK8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms