Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Ube4aE9Q735 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
Ube4aE9Q735 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ube4aE9Q735 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC22.48■■□□□ 1.19
Ube4aE9Q735 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ube4aE9Q735 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ube4aE9Q735 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ube4aE9Q735 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC22.48■■□□□ 1.19
Ube4aE9Q735 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC22.48■■□□□ 1.19
Ube4aE9Q735 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ube4aE9Q735 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC22.48■■□□□ 1.19
Ube4aE9Q735 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ube4aE9Q735 AC153881.1-201ENSMUST00000214448 284 ntBASIC22.48■■□□□ 1.19
Ube4aE9Q735 AC107452.1-201ENSMUST00000227963 481 ntBASIC22.48■■□□□ 1.19
Ube4aE9Q735 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ube4aE9Q735 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ube4aE9Q735 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ube4aE9Q735 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ube4aE9Q735 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ube4aE9Q735 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC22.47■■□□□ 1.19
Ube4aE9Q735 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ube4aE9Q735 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ube4aE9Q735 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ube4aE9Q735 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Ube4aE9Q735 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Ube4aE9Q735 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ube4aE9Q735 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Ube4aE9Q735 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ube4aE9Q735 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ube4aE9Q735 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ube4aE9Q735 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ube4aE9Q735 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC22.46■■□□□ 1.19
Ube4aE9Q735 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC22.46■■□□□ 1.19
Ube4aE9Q735 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ube4aE9Q735 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Ube4aE9Q735 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ube4aE9Q735 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Ube4aE9Q735 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC22.45■■□□□ 1.18
Ube4aE9Q735 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ube4aE9Q735 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Ube4aE9Q735 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ube4aE9Q735 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ube4aE9Q735 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ube4aE9Q735 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ube4aE9Q735 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ube4aE9Q735 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Ube4aE9Q735 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ube4aE9Q735 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ube4aE9Q735 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ube4aE9Q735 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.44■■□□□ 1.18
Ube4aE9Q735 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ube4aE9Q735 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ube4aE9Q735 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC22.43■■□□□ 1.18
Ube4aE9Q735 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ube4aE9Q735 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ube4aE9Q735 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
Ube4aE9Q735 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ube4aE9Q735 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ube4aE9Q735 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ube4aE9Q735 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
Ube4aE9Q735 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC22.43■■□□□ 1.18
Ube4aE9Q735 Mir7071-201ENSMUST00000184847 69 ntBASIC22.43■■□□□ 1.18
Ube4aE9Q735 Alkbh1-212ENSMUST00000185301 408 ntBASIC22.43■■□□□ 1.18
Ube4aE9Q735 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC22.43■■□□□ 1.18
Ube4aE9Q735 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ube4aE9Q735 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ube4aE9Q735 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ube4aE9Q735 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ube4aE9Q735 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ube4aE9Q735 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ube4aE9Q735 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ube4aE9Q735 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ube4aE9Q735 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC22.42■■□□□ 1.18
Ube4aE9Q735 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ube4aE9Q735 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC22.42■■□□□ 1.18
Ube4aE9Q735 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Ube4aE9Q735 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ube4aE9Q735 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC22.42■■□□□ 1.18
Ube4aE9Q735 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ube4aE9Q735 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ube4aE9Q735 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ube4aE9Q735 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ube4aE9Q735 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ube4aE9Q735 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ube4aE9Q735 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ube4aE9Q735 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ube4aE9Q735 Gm715-201ENSMUST00000117865 831 ntBASIC22.41■■□□□ 1.18
Ube4aE9Q735 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC22.41■■□□□ 1.18
Ube4aE9Q735 Zfp783-201ENSMUST00000095946 670 ntBASIC22.41■■□□□ 1.18
Ube4aE9Q735 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Ube4aE9Q735 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ube4aE9Q735 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ube4aE9Q735 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
Ube4aE9Q735 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ube4aE9Q735 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ube4aE9Q735 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ube4aE9Q735 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ube4aE9Q735 Mir1199-201ENSMUST00000117015 119 ntBASIC22.4■■□□□ 1.18
Ube4aE9Q735 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC22.4■■□□□ 1.18
Ube4aE9Q735 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms