Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb9E9Q5G2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb9E9Q5G2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb9E9Q5G2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb9E9Q5G2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.98■■□□□ 1.11
Pcdhb9E9Q5G2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb9E9Q5G2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.98■■□□□ 1.11
Pcdhb9E9Q5G2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Pcdhb9E9Q5G2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Pcdhb9E9Q5G2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Pcdhb9E9Q5G2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Pcdhb9E9Q5G2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb9E9Q5G2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Pcdhb9E9Q5G2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.98■■□□□ 1.11
Pcdhb9E9Q5G2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.98■■□□□ 1.11
Pcdhb9E9Q5G2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb9E9Q5G2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.97■■□□□ 1.11
Pcdhb9E9Q5G2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb9E9Q5G2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb9E9Q5G2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb9E9Q5G2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Pcdhb9E9Q5G2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb9E9Q5G2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Pcdhb9E9Q5G2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.97■■□□□ 1.11
Pcdhb9E9Q5G2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb9E9Q5G2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
Pcdhb9E9Q5G2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb9E9Q5G2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Pcdhb9E9Q5G2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb9E9Q5G2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb9E9Q5G2 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.96■■□□□ 1.11
Pcdhb9E9Q5G2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb9E9Q5G2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb9E9Q5G2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
Pcdhb9E9Q5G2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb9E9Q5G2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb9E9Q5G2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb9E9Q5G2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.96■■□□□ 1.11
Pcdhb9E9Q5G2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb9E9Q5G2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb9E9Q5G2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.11
Pcdhb9E9Q5G2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb9E9Q5G2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb9E9Q5G2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.95■■□□□ 1.1
Pcdhb9E9Q5G2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb9E9Q5G2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.95■■□□□ 1.1
Pcdhb9E9Q5G2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb9E9Q5G2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Pcdhb9E9Q5G2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.95■■□□□ 1.1
Pcdhb9E9Q5G2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb9E9Q5G2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb9E9Q5G2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Pcdhb9E9Q5G2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.95■■□□□ 1.1
Pcdhb9E9Q5G2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Pcdhb9E9Q5G2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Pcdhb9E9Q5G2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.94■■□□□ 1.1
Pcdhb9E9Q5G2 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.94■■□□□ 1.1
Pcdhb9E9Q5G2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Pcdhb9E9Q5G2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb9E9Q5G2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb9E9Q5G2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb9E9Q5G2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb9E9Q5G2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb9E9Q5G2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb9E9Q5G2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb9E9Q5G2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.93■■□□□ 1.1
Pcdhb9E9Q5G2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.93■■□□□ 1.1
Pcdhb9E9Q5G2 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.93■■□□□ 1.1
Pcdhb9E9Q5G2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb9E9Q5G2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb9E9Q5G2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb9E9Q5G2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb9E9Q5G2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb9E9Q5G2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb9E9Q5G2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb9E9Q5G2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb9E9Q5G2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb9E9Q5G2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb9E9Q5G2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.92■■□□□ 1.1
Pcdhb9E9Q5G2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.92■■□□□ 1.1
Pcdhb9E9Q5G2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.92■■□□□ 1.1
Pcdhb9E9Q5G2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Pcdhb9E9Q5G2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb9E9Q5G2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb9E9Q5G2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb9E9Q5G2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb9E9Q5G2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb9E9Q5G2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.91■■□□□ 1.1
Pcdhb9E9Q5G2 Iqck-206ENSMUST00000208658 2891 ntBASIC21.9■■□□□ 1.1
Pcdhb9E9Q5G2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb9E9Q5G2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb9E9Q5G2 Gm12527-201ENSMUST00000117967 564 ntBASIC21.9■■□□□ 1.1
Pcdhb9E9Q5G2 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.9■■□□□ 1.1
Pcdhb9E9Q5G2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.9■■□□□ 1.1
Pcdhb9E9Q5G2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb9E9Q5G2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb9E9Q5G2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.9■■□□□ 1.1
Pcdhb9E9Q5G2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb9E9Q5G2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb9E9Q5G2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms