Protein–RNA interactions for Protein: A8DUK4

Hbb-bs, Beta-globin, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-bsA8DUK4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Hbb-bsA8DUK4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hbb-bsA8DUK4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Hbb-bsA8DUK4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hbb-bsA8DUK4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hbb-bsA8DUK4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hbb-bsA8DUK4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hbb-bsA8DUK4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hbb-bsA8DUK4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hbb-bsA8DUK4 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Hbb-bsA8DUK4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Hbb-bsA8DUK4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hbb-bsA8DUK4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hbb-bsA8DUK4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.18□□□□□ -0.3
Hbb-bsA8DUK4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hbb-bsA8DUK4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hbb-bsA8DUK4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hbb-bsA8DUK4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.18□□□□□ -0.3
Hbb-bsA8DUK4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hbb-bsA8DUK4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hbb-bsA8DUK4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC13.18□□□□□ -0.3
Hbb-bsA8DUK4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hbb-bsA8DUK4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hbb-bsA8DUK4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hbb-bsA8DUK4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hbb-bsA8DUK4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hbb-bsA8DUK4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hbb-bsA8DUK4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hbb-bsA8DUK4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hbb-bsA8DUK4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hbb-bsA8DUK4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hbb-bsA8DUK4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hbb-bsA8DUK4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hbb-bsA8DUK4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hbb-bsA8DUK4 Gm8503-201ENSMUST00000118131 455 ntBASIC13.16□□□□□ -0.3
Hbb-bsA8DUK4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC13.16□□□□□ -0.3
Hbb-bsA8DUK4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC13.16□□□□□ -0.3
Hbb-bsA8DUK4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hbb-bsA8DUK4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hbb-bsA8DUK4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hbb-bsA8DUK4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Hbb-bsA8DUK4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.16□□□□□ -0.3
Hbb-bsA8DUK4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hbb-bsA8DUK4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hbb-bsA8DUK4 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hbb-bsA8DUK4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hbb-bsA8DUK4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hbb-bsA8DUK4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hbb-bsA8DUK4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hbb-bsA8DUK4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hbb-bsA8DUK4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hbb-bsA8DUK4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hbb-bsA8DUK4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hbb-bsA8DUK4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Hbb-bsA8DUK4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
Hbb-bsA8DUK4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hbb-bsA8DUK4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC13.15□□□□□ -0.3
Hbb-bsA8DUK4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hbb-bsA8DUK4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hbb-bsA8DUK4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hbb-bsA8DUK4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hbb-bsA8DUK4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hbb-bsA8DUK4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hbb-bsA8DUK4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hbb-bsA8DUK4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hbb-bsA8DUK4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hbb-bsA8DUK4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hbb-bsA8DUK4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Hbb-bsA8DUK4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hbb-bsA8DUK4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Hbb-bsA8DUK4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hbb-bsA8DUK4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.14□□□□□ -0.31
Hbb-bsA8DUK4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC13.14□□□□□ -0.31
Hbb-bsA8DUK4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hbb-bsA8DUK4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hbb-bsA8DUK4 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms