Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Shroom2A2ALU4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Shroom2A2ALU4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Shroom2A2ALU4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
Shroom2A2ALU4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC29.77■■■□□ 2.36
Shroom2A2ALU4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Shroom2A2ALU4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
Shroom2A2ALU4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Shroom2A2ALU4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC29.76■■■□□ 2.35
Shroom2A2ALU4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
Shroom2A2ALU4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Shroom2A2ALU4 Gm27357-201ENSMUST00000183754 135 ntBASIC29.75■■■□□ 2.35
Shroom2A2ALU4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC29.75■■■□□ 2.35
Shroom2A2ALU4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
Shroom2A2ALU4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC29.75■■■□□ 2.35
Shroom2A2ALU4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
Shroom2A2ALU4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Shroom2A2ALU4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Shroom2A2ALU4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Shroom2A2ALU4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC29.75■■■□□ 2.35
Shroom2A2ALU4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Shroom2A2ALU4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Shroom2A2ALU4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC29.74■■■□□ 2.35
Shroom2A2ALU4 Gm37935-201ENSMUST00000192012 982 ntBASIC29.74■■■□□ 2.35
Shroom2A2ALU4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Shroom2A2ALU4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Shroom2A2ALU4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Shroom2A2ALU4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Shroom2A2ALU4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC29.74■■■□□ 2.35
Shroom2A2ALU4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC29.74■■■□□ 2.35
Shroom2A2ALU4 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Shroom2A2ALU4 Gm24589-201ENSMUST00000116692 94 ntBASIC29.74■■■□□ 2.35
Shroom2A2ALU4 Gm43073-201ENSMUST00000198200 1189 ntBASIC29.74■■■□□ 2.35
Shroom2A2ALU4 Gm18115-201ENSMUST00000221209 621 ntBASIC29.74■■■□□ 2.35
Shroom2A2ALU4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Shroom2A2ALU4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
Shroom2A2ALU4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC29.73■■■□□ 2.35
Shroom2A2ALU4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Shroom2A2ALU4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Shroom2A2ALU4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
Shroom2A2ALU4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Shroom2A2ALU4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
Shroom2A2ALU4 Zfp783-201ENSMUST00000095946 670 ntBASIC29.73■■■□□ 2.35
Shroom2A2ALU4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Shroom2A2ALU4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
Shroom2A2ALU4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
Shroom2A2ALU4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC29.72■■■□□ 2.35
Shroom2A2ALU4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Shroom2A2ALU4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Shroom2A2ALU4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
Shroom2A2ALU4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
Shroom2A2ALU4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Shroom2A2ALU4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Shroom2A2ALU4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Shroom2A2ALU4 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Shroom2A2ALU4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Shroom2A2ALU4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Shroom2A2ALU4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Shroom2A2ALU4 Gm5712-201ENSMUST00000199748 1043 ntBASIC29.7■■■□□ 2.35
Shroom2A2ALU4 Gm5587-201ENSMUST00000206270 674 ntBASIC29.7■■■□□ 2.35
Shroom2A2ALU4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC29.7■■■□□ 2.34
Shroom2A2ALU4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Shroom2A2ALU4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Shroom2A2ALU4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC29.7■■■□□ 2.34
Shroom2A2ALU4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Shroom2A2ALU4 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
Shroom2A2ALU4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC29.69■■■□□ 2.34
Shroom2A2ALU4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Shroom2A2ALU4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
Shroom2A2ALU4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Shroom2A2ALU4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Shroom2A2ALU4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC29.69■■■□□ 2.34
Shroom2A2ALU4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Shroom2A2ALU4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC29.69■■■□□ 2.34
Shroom2A2ALU4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Shroom2A2ALU4 Gm19094-201ENSMUST00000209791 1246 ntBASIC29.68■■■□□ 2.34
Shroom2A2ALU4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Shroom2A2ALU4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Shroom2A2ALU4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Shroom2A2ALU4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Shroom2A2ALU4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC29.68■■■□□ 2.34
Shroom2A2ALU4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC29.68■■■□□ 2.34
Shroom2A2ALU4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Shroom2A2ALU4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Shroom2A2ALU4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Shroom2A2ALU4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Shroom2A2ALU4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Shroom2A2ALU4 Gm29518-201ENSMUST00000190858 372 ntBASIC29.67■■■□□ 2.34
Shroom2A2ALU4 Gm37035-201ENSMUST00000194809 2148 ntBASIC29.67■■■□□ 2.34
Shroom2A2ALU4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC29.67■■■□□ 2.34
Shroom2A2ALU4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Shroom2A2ALU4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC29.66■■■□□ 2.34
Shroom2A2ALU4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC29.66■■■□□ 2.34
Shroom2A2ALU4 Gm2274-201ENSMUST00000184539 609 ntBASIC29.66■■■□□ 2.34
Shroom2A2ALU4 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC29.66■■■□□ 2.34
Shroom2A2ALU4 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
Shroom2A2ALU4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Shroom2A2ALU4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Shroom2A2ALU4 Gm32051-202ENSMUST00000197905 2385 ntBASIC29.65■■■□□ 2.34
Shroom2A2ALU4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms