Protein–RNA interactions for Protein: A2AJK6

Chd7, Chromodomain-helicase-DNA-binding protein 7, mousemouse

Known RBP Predictions only

Length 2,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd7A2AJK6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd7A2AJK6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Chd7A2AJK6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Chd7A2AJK6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.51■□□□□ 0.55
Chd7A2AJK6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Chd7A2AJK6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd7A2AJK6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd7A2AJK6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd7A2AJK6 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd7A2AJK6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.51■□□□□ 0.55
Chd7A2AJK6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.51■□□□□ 0.55
Chd7A2AJK6 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.51■□□□□ 0.55
Chd7A2AJK6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.51■□□□□ 0.55
Chd7A2AJK6 Gm18025-201ENSMUST00000221733 862 ntBASIC18.51■□□□□ 0.55
Chd7A2AJK6 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd7A2AJK6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Chd7A2AJK6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.5■□□□□ 0.55
Chd7A2AJK6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chd7A2AJK6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chd7A2AJK6 Flg-201ENSMUST00000050758 1488 ntBASIC18.5■□□□□ 0.55
Chd7A2AJK6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Chd7A2AJK6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.5■□□□□ 0.55
Chd7A2AJK6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chd7A2AJK6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.5■□□□□ 0.55
Chd7A2AJK6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.5■□□□□ 0.55
Chd7A2AJK6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd7A2AJK6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Chd7A2AJK6 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd7A2AJK6 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.49■□□□□ 0.55
Chd7A2AJK6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Chd7A2AJK6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd7A2AJK6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.49■□□□□ 0.55
Chd7A2AJK6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd7A2AJK6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd7A2AJK6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd7A2AJK6 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd7A2AJK6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Chd7A2AJK6 Gm18959-201ENSMUST00000208954 655 ntBASIC18.48■□□□□ 0.55
Chd7A2AJK6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd7A2AJK6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd7A2AJK6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Chd7A2AJK6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Chd7A2AJK6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Chd7A2AJK6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Chd7A2AJK6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd7A2AJK6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd7A2AJK6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd7A2AJK6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Chd7A2AJK6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd7A2AJK6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Chd7A2AJK6 Gm18032-201ENSMUST00000222541 538 ntBASIC18.47■□□□□ 0.55
Chd7A2AJK6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd7A2AJK6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Chd7A2AJK6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.46■□□□□ 0.55
Chd7A2AJK6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chd7A2AJK6 Gm15375-201ENSMUST00000119510 849 ntBASIC18.46■□□□□ 0.55
Chd7A2AJK6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chd7A2AJK6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.46■□□□□ 0.55
Chd7A2AJK6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chd7A2AJK6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Chd7A2AJK6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chd7A2AJK6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.46■□□□□ 0.55
Chd7A2AJK6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chd7A2AJK6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chd7A2AJK6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chd7A2AJK6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chd7A2AJK6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chd7A2AJK6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.46■□□□□ 0.55
Chd7A2AJK6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.46■□□□□ 0.54
Chd7A2AJK6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chd7A2AJK6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Chd7A2AJK6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chd7A2AJK6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chd7A2AJK6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Chd7A2AJK6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chd7A2AJK6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chd7A2AJK6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chd7A2AJK6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chd7A2AJK6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chd7A2AJK6 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chd7A2AJK6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd7A2AJK6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd7A2AJK6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Chd7A2AJK6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd7A2AJK6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Chd7A2AJK6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Chd7A2AJK6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd7A2AJK6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd7A2AJK6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.44■□□□□ 0.54
Chd7A2AJK6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd7A2AJK6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.44■□□□□ 0.54
Chd7A2AJK6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Chd7A2AJK6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd7A2AJK6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd7A2AJK6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Chd7A2AJK6 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chd7A2AJK6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Chd7A2AJK6 Gm7284-201ENSMUST00000131667 944 ntBASIC18.43■□□□□ 0.54
Chd7A2AJK6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chd7A2AJK6 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms