Protein–RNA interactions for Protein: A2ACP1

Ttc39a, Tetratricopeptide repeat protein 39A, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39aA2ACP1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc39aA2ACP1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc39aA2ACP1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc39aA2ACP1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.16■□□□□ 0.5
Ttc39aA2ACP1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc39aA2ACP1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc39aA2ACP1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc39aA2ACP1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.16■□□□□ 0.5
Ttc39aA2ACP1 Gm27275-201ENSMUST00000184318 272 ntBASIC18.16■□□□□ 0.5
Ttc39aA2ACP1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.16■□□□□ 0.5
Ttc39aA2ACP1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc39aA2ACP1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc39aA2ACP1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc39aA2ACP1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc39aA2ACP1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc39aA2ACP1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc39aA2ACP1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Ttc39aA2ACP1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc39aA2ACP1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc39aA2ACP1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc39aA2ACP1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc39aA2ACP1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc39aA2ACP1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc39aA2ACP1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc39aA2ACP1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc39aA2ACP1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc39aA2ACP1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc39aA2ACP1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc39aA2ACP1 Gm18666-201ENSMUST00000190039 958 ntBASIC18.15■□□□□ 0.5
Ttc39aA2ACP1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc39aA2ACP1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc39aA2ACP1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc39aA2ACP1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc39aA2ACP1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc39aA2ACP1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ttc39aA2ACP1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ttc39aA2ACP1 Gm5643-201ENSMUST00000117081 966 ntBASIC18.14■□□□□ 0.49
Ttc39aA2ACP1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ttc39aA2ACP1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ttc39aA2ACP1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ttc39aA2ACP1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.14■□□□□ 0.49
Ttc39aA2ACP1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ttc39aA2ACP1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ttc39aA2ACP1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ttc39aA2ACP1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ttc39aA2ACP1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ttc39aA2ACP1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ttc39aA2ACP1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ttc39aA2ACP1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ttc39aA2ACP1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ttc39aA2ACP1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ttc39aA2ACP1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ttc39aA2ACP1 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.13■□□□□ 0.49
Ttc39aA2ACP1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ttc39aA2ACP1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ttc39aA2ACP1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ttc39aA2ACP1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.13■□□□□ 0.49
Ttc39aA2ACP1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ttc39aA2ACP1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ttc39aA2ACP1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ttc39aA2ACP1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ttc39aA2ACP1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ttc39aA2ACP1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.11■□□□□ 0.49
Ttc39aA2ACP1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Ttc39aA2ACP1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ttc39aA2ACP1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.11■□□□□ 0.49
Ttc39aA2ACP1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ttc39aA2ACP1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ttc39aA2ACP1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ttc39aA2ACP1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ttc39aA2ACP1 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.11■□□□□ 0.49
Ttc39aA2ACP1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ttc39aA2ACP1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ttc39aA2ACP1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ttc39aA2ACP1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.11■□□□□ 0.49
Ttc39aA2ACP1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ttc39aA2ACP1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ttc39aA2ACP1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ttc39aA2ACP1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ttc39aA2ACP1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ttc39aA2ACP1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
Ttc39aA2ACP1 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.1■□□□□ 0.49
Ttc39aA2ACP1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Ttc39aA2ACP1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ttc39aA2ACP1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ttc39aA2ACP1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ttc39aA2ACP1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.09■□□□□ 0.49
Ttc39aA2ACP1 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.09■□□□□ 0.49
Ttc39aA2ACP1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ttc39aA2ACP1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
Ttc39aA2ACP1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ttc39aA2ACP1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ttc39aA2ACP1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.09■□□□□ 0.49
Ttc39aA2ACP1 Gm6576-201ENSMUST00000169678 883 ntBASIC18.09■□□□□ 0.49
Ttc39aA2ACP1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.09■□□□□ 0.49
Ttc39aA2ACP1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ttc39aA2ACP1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ttc39aA2ACP1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ttc39aA2ACP1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ttc39aA2ACP1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms