Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv1-88A0A140T8N1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv1-88A0A140T8N1 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv1-88A0A140T8N1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv1-88A0A140T8N1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv1-88A0A140T8N1 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv1-88A0A140T8N1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv1-88A0A140T8N1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Igkv1-88A0A140T8N1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv1-88A0A140T8N1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv1-88A0A140T8N1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv1-88A0A140T8N1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv1-88A0A140T8N1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv1-88A0A140T8N1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv1-88A0A140T8N1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC12.28□□□□□ -0.44
Igkv1-88A0A140T8N1 Gm42911-201ENSMUST00000199360 1630 ntBASIC12.28□□□□□ -0.44
Igkv1-88A0A140T8N1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv1-88A0A140T8N1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv1-88A0A140T8N1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Igkv1-88A0A140T8N1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv1-88A0A140T8N1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv1-88A0A140T8N1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv1-88A0A140T8N1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv1-88A0A140T8N1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Igkv1-88A0A140T8N1 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Igkv1-88A0A140T8N1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Igkv1-88A0A140T8N1 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Igkv1-88A0A140T8N1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Igkv1-88A0A140T8N1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Igkv1-88A0A140T8N1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Igkv1-88A0A140T8N1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC12.27□□□□□ -0.45
Igkv1-88A0A140T8N1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Igkv1-88A0A140T8N1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC12.27□□□□□ -0.45
Igkv1-88A0A140T8N1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC12.27□□□□□ -0.45
Igkv1-88A0A140T8N1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC12.27□□□□□ -0.45
Igkv1-88A0A140T8N1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Igkv1-88A0A140T8N1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Igkv1-88A0A140T8N1 Gm37352-201ENSMUST00000193908 2181 ntBASIC12.27□□□□□ -0.45
Igkv1-88A0A140T8N1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Igkv1-88A0A140T8N1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Igkv1-88A0A140T8N1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Igkv1-88A0A140T8N1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Igkv1-88A0A140T8N1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Igkv1-88A0A140T8N1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Igkv1-88A0A140T8N1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Igkv1-88A0A140T8N1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Igkv1-88A0A140T8N1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Igkv1-88A0A140T8N1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv1-88A0A140T8N1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv1-88A0A140T8N1 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Igkv1-88A0A140T8N1 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Igkv1-88A0A140T8N1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv1-88A0A140T8N1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC12.26□□□□□ -0.45
Igkv1-88A0A140T8N1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv1-88A0A140T8N1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv1-88A0A140T8N1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Igkv1-88A0A140T8N1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv1-88A0A140T8N1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv1-88A0A140T8N1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv1-88A0A140T8N1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv1-88A0A140T8N1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Igkv1-88A0A140T8N1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv1-88A0A140T8N1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv1-88A0A140T8N1 Gm10571-201ENSMUST00000097869 1638 ntBASIC12.26□□□□□ -0.45
Igkv1-88A0A140T8N1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv1-88A0A140T8N1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv1-88A0A140T8N1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv1-88A0A140T8N1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv1-88A0A140T8N1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv1-88A0A140T8N1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv1-88A0A140T8N1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv1-88A0A140T8N1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv1-88A0A140T8N1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Igkv1-88A0A140T8N1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv1-88A0A140T8N1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms