Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.45■□□□□ 0.06
Trbv29A0A0G2LB96 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv29A0A0G2LB96 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv29A0A0G2LB96 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv29A0A0G2LB96 Gm11421-201ENSMUST00000122124 294 ntBASIC15.45■□□□□ 0.06
Trbv29A0A0G2LB96 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trbv29A0A0G2LB96 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.45■□□□□ 0.06
Trbv29A0A0G2LB96 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv29A0A0G2LB96 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv29A0A0G2LB96 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv29A0A0G2LB96 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv29A0A0G2LB96 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv29A0A0G2LB96 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.45■□□□□ 0.06
Trbv29A0A0G2LB96 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.45■□□□□ 0.06
Trbv29A0A0G2LB96 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv29A0A0G2LB96 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv29A0A0G2LB96 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv29A0A0G2LB96 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.44■□□□□ 0.06
Trbv29A0A0G2LB96 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv29A0A0G2LB96 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv29A0A0G2LB96 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trbv29A0A0G2LB96 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv29A0A0G2LB96 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv29A0A0G2LB96 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv29A0A0G2LB96 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv29A0A0G2LB96 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Trbv29A0A0G2LB96 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv29A0A0G2LB96 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Trbv29A0A0G2LB96 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv29A0A0G2LB96 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv29A0A0G2LB96 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv29A0A0G2LB96 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv29A0A0G2LB96 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trbv29A0A0G2LB96 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv29A0A0G2LB96 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv29A0A0G2LB96 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv29A0A0G2LB96 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv29A0A0G2LB96 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv29A0A0G2LB96 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv29A0A0G2LB96 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv29A0A0G2LB96 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Trbv29A0A0G2LB96 Smad6-203ENSMUST00000179458 273 ntBASIC15.43■□□□□ 0.06
Trbv29A0A0G2LB96 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv29A0A0G2LB96 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv29A0A0G2LB96 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv29A0A0G2LB96 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv29A0A0G2LB96 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv29A0A0G2LB96 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv29A0A0G2LB96 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv29A0A0G2LB96 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv29A0A0G2LB96 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv29A0A0G2LB96 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv29A0A0G2LB96 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Gm27801-201ENSMUST00000184174 223 ntBASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.42■□□□□ 0.06
Trbv29A0A0G2LB96 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv29A0A0G2LB96 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.41■□□□□ 0.06
Trbv29A0A0G2LB96 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv29A0A0G2LB96 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trbv29A0A0G2LB96 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv29A0A0G2LB96 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv29A0A0G2LB96 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.41■□□□□ 0.06
Trbv29A0A0G2LB96 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.41■□□□□ 0.06
Trbv29A0A0G2LB96 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.41■□□□□ 0.06
Trbv29A0A0G2LB96 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv29A0A0G2LB96 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv29A0A0G2LB96 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.41■□□□□ 0.06
Trbv29A0A0G2LB96 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv29A0A0G2LB96 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv29A0A0G2LB96 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv29A0A0G2LB96 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv29A0A0G2LB96 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trbv29A0A0G2LB96 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv29A0A0G2LB96 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms