Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv15A0A0A6YYE3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv15A0A0A6YYE3 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.43■□□□□ 0.06
Trbv15A0A0A6YYE3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv15A0A0A6YYE3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.43■□□□□ 0.06
Trbv15A0A0A6YYE3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
Trbv15A0A0A6YYE3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv15A0A0A6YYE3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv15A0A0A6YYE3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv15A0A0A6YYE3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv15A0A0A6YYE3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.43■□□□□ 0.06
Trbv15A0A0A6YYE3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv15A0A0A6YYE3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv15A0A0A6YYE3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv15A0A0A6YYE3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.43■□□□□ 0.06
Trbv15A0A0A6YYE3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv15A0A0A6YYE3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.43■□□□□ 0.06
Trbv15A0A0A6YYE3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.42■□□□□ 0.06
Trbv15A0A0A6YYE3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv15A0A0A6YYE3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.42■□□□□ 0.06
Trbv15A0A0A6YYE3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv15A0A0A6YYE3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv15A0A0A6YYE3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.42■□□□□ 0.06
Trbv15A0A0A6YYE3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.42■□□□□ 0.06
Trbv15A0A0A6YYE3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.42■□□□□ 0.06
Trbv15A0A0A6YYE3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv15A0A0A6YYE3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Trbv15A0A0A6YYE3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv15A0A0A6YYE3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Trbv15A0A0A6YYE3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv15A0A0A6YYE3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Gm7860-201ENSMUST00000121190 879 ntBASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Fst-202ENSMUST00000223640 2612 ntBASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv15A0A0A6YYE3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv15A0A0A6YYE3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv15A0A0A6YYE3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv15A0A0A6YYE3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv15A0A0A6YYE3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv15A0A0A6YYE3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv15A0A0A6YYE3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Trbv15A0A0A6YYE3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv15A0A0A6YYE3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trbv15A0A0A6YYE3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv15A0A0A6YYE3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv15A0A0A6YYE3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv15A0A0A6YYE3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv15A0A0A6YYE3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv15A0A0A6YYE3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.4■□□□□ 0.06
Trbv15A0A0A6YYE3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trbv15A0A0A6YYE3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv15A0A0A6YYE3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv15A0A0A6YYE3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv15A0A0A6YYE3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Trbv15A0A0A6YYE3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv15A0A0A6YYE3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv15A0A0A6YYE3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv15A0A0A6YYE3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv15A0A0A6YYE3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv15A0A0A6YYE3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv15A0A0A6YYE3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trbv15A0A0A6YYE3 Gm8969-201ENSMUST00000199694 526 ntBASIC15.39■□□□□ 0.05
Trbv15A0A0A6YYE3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.39■□□□□ 0.05
Trbv15A0A0A6YYE3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv15A0A0A6YYE3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv15A0A0A6YYE3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv15A0A0A6YYE3 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.39■□□□□ 0.05
Trbv15A0A0A6YYE3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Trbv15A0A0A6YYE3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv15A0A0A6YYE3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv15A0A0A6YYE3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv15A0A0A6YYE3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv15A0A0A6YYE3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv15A0A0A6YYE3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv15A0A0A6YYE3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.38■□□□□ 0.05
Trbv15A0A0A6YYE3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trbv15A0A0A6YYE3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms