Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Rarb-207ENSMUST00000225921 2756 ntBASIC15.23■□□□□ 0.03
Trav18A0A075B656 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav18A0A075B656 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav18A0A075B656 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav18A0A075B656 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
Trav18A0A075B656 Gm12821-201ENSMUST00000120022 600 ntBASIC15.23■□□□□ 0.03
Trav18A0A075B656 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.23■□□□□ 0.03
Trav18A0A075B656 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.23■□□□□ 0.03
Trav18A0A075B656 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.23■□□□□ 0.03
Trav18A0A075B656 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav18A0A075B656 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav18A0A075B656 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav18A0A075B656 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav18A0A075B656 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav18A0A075B656 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav18A0A075B656 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav18A0A075B656 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav18A0A075B656 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav18A0A075B656 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav18A0A075B656 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav18A0A075B656 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav18A0A075B656 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trav18A0A075B656 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
Trav18A0A075B656 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav18A0A075B656 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav18A0A075B656 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav18A0A075B656 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav18A0A075B656 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav18A0A075B656 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav18A0A075B656 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav18A0A075B656 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav18A0A075B656 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav18A0A075B656 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav18A0A075B656 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav18A0A075B656 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav18A0A075B656 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.21■□□□□ 0.03
Trav18A0A075B656 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav18A0A075B656 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav18A0A075B656 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav18A0A075B656 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav18A0A075B656 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Trav18A0A075B656 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav18A0A075B656 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav18A0A075B656 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Trav18A0A075B656 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav18A0A075B656 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav18A0A075B656 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trav18A0A075B656 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav18A0A075B656 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav18A0A075B656 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav18A0A075B656 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav18A0A075B656 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav18A0A075B656 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav18A0A075B656 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav18A0A075B656 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.2■□□□□ 0.02
Trav18A0A075B656 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav18A0A075B656 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav18A0A075B656 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav18A0A075B656 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Trav18A0A075B656 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav18A0A075B656 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav18A0A075B656 Gm45417-201ENSMUST00000209533 758 ntBASIC15.2■□□□□ 0.02
Trav18A0A075B656 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav18A0A075B656 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav18A0A075B656 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav18A0A075B656 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav18A0A075B656 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav18A0A075B656 Gm6139-201ENSMUST00000079261 882 ntBASIC15.2■□□□□ 0.02
Trav18A0A075B656 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav18A0A075B656 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav18A0A075B656 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav18A0A075B656 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav18A0A075B656 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav18A0A075B656 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav18A0A075B656 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav18A0A075B656 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.19■□□□□ 0.02
Trav18A0A075B656 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav18A0A075B656 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav18A0A075B656 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav18A0A075B656 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav18A0A075B656 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav18A0A075B656 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Trav18A0A075B656 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav18A0A075B656 Gm26833-201ENSMUST00000180899 440 ntBASIC15.19■□□□□ 0.02
Trav18A0A075B656 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.19■□□□□ 0.02
Trav18A0A075B656 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav18A0A075B656 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav18A0A075B656 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav18A0A075B656 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav18A0A075B656 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav18A0A075B656 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav18A0A075B656 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav18A0A075B656 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav18A0A075B656 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Trav18A0A075B656 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav18A0A075B656 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav18A0A075B656 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav18A0A075B656 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav18A0A075B656 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav18A0A075B656 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms