Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4-2A0A075B638 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4-2A0A075B638 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4-2A0A075B638 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4-2A0A075B638 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4-2A0A075B638 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4-2A0A075B638 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4-2A0A075B638 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4-2A0A075B638 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4-2A0A075B638 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4-2A0A075B638 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav4-2A0A075B638 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav4-2A0A075B638 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav4-2A0A075B638 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav4-2A0A075B638 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav4-2A0A075B638 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav4-2A0A075B638 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav4-2A0A075B638 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav4-2A0A075B638 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav4-2A0A075B638 Gm8969-201ENSMUST00000199694 526 ntBASIC14.74□□□□□ -0.05
Trav4-2A0A075B638 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
Trav4-2A0A075B638 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav4-2A0A075B638 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav4-2A0A075B638 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4-2A0A075B638 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav4-2A0A075B638 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav4-2A0A075B638 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4-2A0A075B638 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4-2A0A075B638 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav4-2A0A075B638 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4-2A0A075B638 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4-2A0A075B638 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Trav4-2A0A075B638 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4-2A0A075B638 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4-2A0A075B638 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4-2A0A075B638 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4-2A0A075B638 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav4-2A0A075B638 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4-2A0A075B638 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4-2A0A075B638 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4-2A0A075B638 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.73□□□□□ -0.05
Trav4-2A0A075B638 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4-2A0A075B638 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4-2A0A075B638 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4-2A0A075B638 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4-2A0A075B638 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4-2A0A075B638 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4-2A0A075B638 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-2A0A075B638 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-2A0A075B638 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-2A0A075B638 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Trav4-2A0A075B638 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-2A0A075B638 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-2A0A075B638 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.72□□□□□ -0.05
Trav4-2A0A075B638 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.72□□□□□ -0.05
Trav4-2A0A075B638 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-2A0A075B638 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
Trav4-2A0A075B638 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-2A0A075B638 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-2A0A075B638 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-2A0A075B638 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trav4-2A0A075B638 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav4-2A0A075B638 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-2A0A075B638 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav4-2A0A075B638 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav4-2A0A075B638 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.72□□□□□ -0.05
Trav4-2A0A075B638 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-2A0A075B638 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-2A0A075B638 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-2A0A075B638 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4-2A0A075B638 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4-2A0A075B638 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.71□□□□□ -0.05
Trav4-2A0A075B638 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4-2A0A075B638 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4-2A0A075B638 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4-2A0A075B638 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4-2A0A075B638 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4-2A0A075B638 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4-2A0A075B638 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4-2A0A075B638 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav4-2A0A075B638 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4-2A0A075B638 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav4-2A0A075B638 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4-2A0A075B638 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4-2A0A075B638 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.71□□□□□ -0.05
Trav4-2A0A075B638 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trav4-2A0A075B638 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4-2A0A075B638 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4-2A0A075B638 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4-2A0A075B638 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav4-2A0A075B638 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4-2A0A075B638 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4-2A0A075B638 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4-2A0A075B638 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav4-2A0A075B638 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
Trav4-2A0A075B638 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Trav4-2A0A075B638 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4-2A0A075B638 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4-2A0A075B638 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav4-2A0A075B638 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms