Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Trav1A0A075B5Z4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav1A0A075B5Z4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav1A0A075B5Z4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav1A0A075B5Z4 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.34■□□□□ 0.37
Trav1A0A075B5Z4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav1A0A075B5Z4 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.33■□□□□ 0.37
Trav1A0A075B5Z4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav1A0A075B5Z4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav1A0A075B5Z4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav1A0A075B5Z4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav1A0A075B5Z4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.33■□□□□ 0.36
Trav1A0A075B5Z4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav1A0A075B5Z4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav1A0A075B5Z4 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav1A0A075B5Z4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.33■□□□□ 0.36
Trav1A0A075B5Z4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.33■□□□□ 0.36
Trav1A0A075B5Z4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav1A0A075B5Z4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav1A0A075B5Z4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav1A0A075B5Z4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav1A0A075B5Z4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
Trav1A0A075B5Z4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav1A0A075B5Z4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.32■□□□□ 0.36
Trav1A0A075B5Z4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav1A0A075B5Z4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Trav1A0A075B5Z4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav1A0A075B5Z4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Trav1A0A075B5Z4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav1A0A075B5Z4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav1A0A075B5Z4 Grk6-206ENSMUST00000224995 2971 ntBASIC17.31■□□□□ 0.36
Trav1A0A075B5Z4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav1A0A075B5Z4 Reep4-203ENSMUST00000226563 1444 ntBASIC17.31■□□□□ 0.36
Trav1A0A075B5Z4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav1A0A075B5Z4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav1A0A075B5Z4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav1A0A075B5Z4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav1A0A075B5Z4 Gm9988-201ENSMUST00000069786 435 ntBASIC17.31■□□□□ 0.36
Trav1A0A075B5Z4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav1A0A075B5Z4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav1A0A075B5Z4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trav1A0A075B5Z4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav1A0A075B5Z4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav1A0A075B5Z4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trav1A0A075B5Z4 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.3■□□□□ 0.36
Trav1A0A075B5Z4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.3■□□□□ 0.36
Trav1A0A075B5Z4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav1A0A075B5Z4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav1A0A075B5Z4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav1A0A075B5Z4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav1A0A075B5Z4 Gm13534-201ENSMUST00000121169 513 ntBASIC17.3■□□□□ 0.36
Trav1A0A075B5Z4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.3■□□□□ 0.36
Trav1A0A075B5Z4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trav1A0A075B5Z4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav1A0A075B5Z4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav1A0A075B5Z4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Trav1A0A075B5Z4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav1A0A075B5Z4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav1A0A075B5Z4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav1A0A075B5Z4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Trav1A0A075B5Z4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav1A0A075B5Z4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Trav1A0A075B5Z4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.29■□□□□ 0.36
Trav1A0A075B5Z4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav1A0A075B5Z4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav1A0A075B5Z4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav1A0A075B5Z4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav1A0A075B5Z4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav1A0A075B5Z4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav1A0A075B5Z4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav1A0A075B5Z4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav1A0A075B5Z4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav1A0A075B5Z4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.28■□□□□ 0.36
Trav1A0A075B5Z4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.28■□□□□ 0.36
Trav1A0A075B5Z4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav1A0A075B5Z4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav1A0A075B5Z4 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.28■□□□□ 0.36
Trav1A0A075B5Z4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav1A0A075B5Z4 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav1A0A075B5Z4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav1A0A075B5Z4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav1A0A075B5Z4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav1A0A075B5Z4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav1A0A075B5Z4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav1A0A075B5Z4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav1A0A075B5Z4 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav1A0A075B5Z4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav1A0A075B5Z4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav1A0A075B5Z4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav1A0A075B5Z4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.27■□□□□ 0.36
Trav1A0A075B5Z4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
Trav1A0A075B5Z4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav1A0A075B5Z4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav1A0A075B5Z4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav1A0A075B5Z4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trav1A0A075B5Z4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trav1A0A075B5Z4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav1A0A075B5Z4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav1A0A075B5Z4 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.26■□□□□ 0.35
Trav1A0A075B5Z4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms