Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm11969-201ENSMUST00000118848 356 ntBASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Gm16407-201ENSMUST00000122134 567 ntBASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Gm17129-201ENSMUST00000168168 505 ntBASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Gm18349-201ENSMUST00000187440 904 ntBASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Gm26413-202ENSMUST00000198972 127 ntBASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Rtp4-203ENSMUST00000210901 1158 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 AC099629.1-201ENSMUST00000226778 464 ntBASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Ephx2-202ENSMUST00000224698 1985 ntBASIC8.04□□□□□ -1.12
Chmp2aQ9DB34 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Cherp-201ENSMUST00000079510 3713 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Gm37326-201ENSMUST00000192828 3071 ntBASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 BC025920-201ENSMUST00000099442 2785 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 AC166159.1-201ENSMUST00000227154 1380 ntBASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 BC002163-201ENSMUST00000121906 319 ntBASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Gm12967-201ENSMUST00000122147 289 ntBASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Mir1962-201ENSMUST00000157516 121 ntBASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Mir1231-201ENSMUST00000175639 81 ntBASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Gm38078-201ENSMUST00000192771 392 ntBASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Gm43553-201ENSMUST00000200900 685 ntBASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Gm44561-201ENSMUST00000208869 264 ntBASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 CT572999.1-201ENSMUST00000220315 1260 ntBASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 AC140208.1-201ENSMUST00000226609 285 ntBASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Gm43571-201ENSMUST00000200067 3098 ntBASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Malat1-201ENSMUST00000172812 6983 ntBASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Gm43750-201ENSMUST00000199027 2493 ntBASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Clec1a-201ENSMUST00000037481 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Chmp2aQ9DB34 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.12
Chmp2aQ9DB34 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Chmp2aQ9DB34 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Chmp2aQ9DB34 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Chmp2aQ9DB34 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Chmp2aQ9DB34 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Chmp2aQ9DB34 Gm43158-201ENSMUST00000198484 1555 ntBASIC8.02□□□□□ -1.13
Chmp2aQ9DB34 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Chmp2aQ9DB34 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Chmp2aQ9DB34 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Chmp2aQ9DB34 Gm43621-201ENSMUST00000202733 2022 ntBASIC8.02□□□□□ -1.13
Chmp2aQ9DB34 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
Chmp2aQ9DB34 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Chmp2aQ9DB34 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Chmp2aQ9DB34 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Chmp2aQ9DB34 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC8.02□□□□□ -1.13
Chmp2aQ9DB34 Gm12365-201ENSMUST00000117931 568 ntBASIC8.02□□□□□ -1.13
Chmp2aQ9DB34 Gm9392-201ENSMUST00000119337 554 ntBASIC8.02□□□□□ -1.13
Chmp2aQ9DB34 Gm12297-201ENSMUST00000121380 979 ntBASIC8.02□□□□□ -1.13
Chmp2aQ9DB34 Gm22670-201ENSMUST00000158724 143 ntBASIC8.02□□□□□ -1.13
Chmp2aQ9DB34 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Chmp2aQ9DB34 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC8.02□□□□□ -1.13
Chmp2aQ9DB34 Gm26505-201ENSMUST00000176208 166 ntBASIC8.02□□□□□ -1.13
Chmp2aQ9DB34 Gm25947-201ENSMUST00000180343 110 ntBASIC8.02□□□□□ -1.13
Chmp2aQ9DB34 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC8.02□□□□□ -1.13
Chmp2aQ9DB34 Gm28728-201ENSMUST00000189087 405 ntBASIC8.02□□□□□ -1.13
Chmp2aQ9DB34 Ighv1-38-201ENSMUST00000192755 349 ntBASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms