Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Spaca7-203ENSMUST00000210276 715 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Gm45756-201ENSMUST00000212491 407 ntBASIC8.83□□□□□ -1
Trim29Q8R2Q0 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Gm4977-201ENSMUST00000215709 1262 ntBASIC8.83□□□□□ -1
Trim29Q8R2Q0 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Klk1b3-201ENSMUST00000085450 889 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Prps1l1-201ENSMUST00000134550 1676 ntAPPRIS P1 BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Gm43254-201ENSMUST00000199187 2491 ntBASIC8.83□□□□□ -1
Trim29Q8R2Q0 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim29Q8R2Q0 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Gm44187-201ENSMUST00000204735 1929 ntBASIC8.83□□□□□ -1
Trim29Q8R2Q0 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim29Q8R2Q0 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim29Q8R2Q0 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Gm24334-201ENSMUST00000104210 128 ntBASIC8.82□□□□□ -1
Trim29Q8R2Q0 Gm7785-201ENSMUST00000117121 892 ntBASIC8.82□□□□□ -1
Trim29Q8R2Q0 Gm12024-201ENSMUST00000118819 1253 ntBASIC8.82□□□□□ -1
Trim29Q8R2Q0 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC8.82□□□□□ -1
Trim29Q8R2Q0 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC8.82□□□□□ -1
Trim29Q8R2Q0 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC8.82□□□□□ -1
Trim29Q8R2Q0 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC8.82□□□□□ -1
Trim29Q8R2Q0 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Gm38164-201ENSMUST00000192810 330 ntBASIC8.82□□□□□ -1
Trim29Q8R2Q0 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC8.82□□□□□ -1
Trim29Q8R2Q0 4933432K03Rik-201ENSMUST00000205739 1247 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Gm18060-201ENSMUST00000207407 564 ntBASIC8.82□□□□□ -1
Trim29Q8R2Q0 CT009546.3-201ENSMUST00000220914 208 ntBASIC8.82□□□□□ -1
Trim29Q8R2Q0 AC092710.1-201ENSMUST00000221005 192 ntBASIC8.82□□□□□ -1
Trim29Q8R2Q0 AC163041.2-201ENSMUST00000223082 573 ntBASIC8.82□□□□□ -1
Trim29Q8R2Q0 CT030170.6-202ENSMUST00000223186 544 ntBASIC8.82□□□□□ -1
Trim29Q8R2Q0 Tmem225-201ENSMUST00000046333 993 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Gm24143-201ENSMUST00000082633 145 ntBASIC8.82□□□□□ -1
Trim29Q8R2Q0 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Parp11-203ENSMUST00000112193 1725 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim29Q8R2Q0 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
Trim29Q8R2Q0 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Trim29Q8R2Q0 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim29Q8R2Q0 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Trim29Q8R2Q0 Gm43519-201ENSMUST00000197239 1872 ntBASIC8.81□□□□□ -1
Trim29Q8R2Q0 Duxbl2-201ENSMUST00000100810 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim29Q8R2Q0 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim29Q8R2Q0 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
Trim29Q8R2Q0 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim29Q8R2Q0 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim29Q8R2Q0 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim29Q8R2Q0 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC8.81□□□□□ -1
Trim29Q8R2Q0 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trim29Q8R2Q0 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim29Q8R2Q0 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim29Q8R2Q0 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim29Q8R2Q0 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC8.81□□□□□ -1
Trim29Q8R2Q0 A930031H19Rik-202ENSMUST00000153810 949 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim29Q8R2Q0 Gm24994-201ENSMUST00000157414 121 ntBASIC8.81□□□□□ -1
Trim29Q8R2Q0 Gm26407-201ENSMUST00000158504 307 ntBASIC8.81□□□□□ -1
Trim29Q8R2Q0 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC8.81□□□□□ -1
Trim29Q8R2Q0 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim29Q8R2Q0 Mir6415-201ENSMUST00000184064 100 ntBASIC8.81□□□□□ -1
Trim29Q8R2Q0 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Trim29Q8R2Q0 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Trim29Q8R2Q0 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trim29Q8R2Q0 Gm29126-201ENSMUST00000188686 151 ntBASIC8.81□□□□□ -1
Trim29Q8R2Q0 Gm43013-201ENSMUST00000198216 247 ntBASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms