Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Tmem27-202ENSMUST00000112280 1389 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 AC140393.3-201ENSMUST00000228396 1352 ntBASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 Gngt2-202ENSMUST00000100532 573 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 Zfp467-207ENSMUST00000114563 463 ntTSL 5 BASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 Gm26048-201ENSMUST00000157305 142 ntBASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 Gm28918-201ENSMUST00000188822 699 ntBASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 Gm28530-201ENSMUST00000190473 577 ntBASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 Gm37623-201ENSMUST00000193691 803 ntTSL 3 BASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 Gm43743-201ENSMUST00000197898 697 ntBASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 4930557K07Rik-201ENSMUST00000205110 363 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 Gm39662-201ENSMUST00000211909 1227 ntTSL 5 BASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 Olfr24-201ENSMUST00000066997 1157 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc87Q8CDL9 Atg4a-201ENSMUST00000112971 2202 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Ccdc87Q8CDL9 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Ccdc87Q8CDL9 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm371-201ENSMUST00000142240 1245 ntBASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm22847-201ENSMUST00000157707 105 ntBASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm25455-201ENSMUST00000157946 325 ntBASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Stard6-202ENSMUST00000164223 976 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm8893-201ENSMUST00000172146 1242 ntBASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm24307-201ENSMUST00000178512 101 ntBASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm8919-201ENSMUST00000182028 1014 ntBASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm27224-201ENSMUST00000184749 564 ntTSL 3 BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Mir6972-201ENSMUST00000184774 64 ntBASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm8870-201ENSMUST00000188170 775 ntBASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 1700036G14Rik-201ENSMUST00000189046 542 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm29491-201ENSMUST00000189481 506 ntTSL 5 BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm38143-201ENSMUST00000191751 644 ntTSL 3 BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm37676-201ENSMUST00000195496 507 ntBASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm43461-201ENSMUST00000202351 996 ntBASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm45274-201ENSMUST00000209938 647 ntTSL 3 BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm8575-201ENSMUST00000210262 521 ntBASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm8667-201ENSMUST00000211112 449 ntBASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm21941-201ENSMUST00000221121 562 ntBASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm35514-201ENSMUST00000221615 352 ntTSL 5 BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 AC107663.2-201ENSMUST00000225534 1234 ntBASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm6083-201ENSMUST00000075518 357 ntBASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 n-R5s156-201ENSMUST00000083377 105 ntBASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm5614-201ENSMUST00000091097 318 ntBASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Olfr1286-201ENSMUST00000099617 918 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm26967-201ENSMUST00000182878 2303 ntBASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm19028-201ENSMUST00000189614 1873 ntBASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Slc16a4-202ENSMUST00000106723 1781 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm43343-201ENSMUST00000202454 1926 ntBASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 Gm43409-201ENSMUST00000195921 2162 ntTSL 5 BASIC8.27□□□□□ -1.09
Ccdc87Q8CDL9 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc87Q8CDL9 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC8.26□□□□□ -1.09
Ccdc87Q8CDL9 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Ccdc87Q8CDL9 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc87Q8CDL9 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Ccdc87Q8CDL9 Gm26569-201ENSMUST00000181968 1789 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc87Q8CDL9 Ighv1-82-201ENSMUST00000103549 294 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Ccdc87Q8CDL9 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc87Q8CDL9 Gm14485-201ENSMUST00000119489 493 ntBASIC8.26□□□□□ -1.09
Ccdc87Q8CDL9 Gm15763-201ENSMUST00000120136 403 ntBASIC8.26□□□□□ -1.09
Ccdc87Q8CDL9 Gm11622-201ENSMUST00000120525 691 ntBASIC8.26□□□□□ -1.09
Ccdc87Q8CDL9 Gm13726-201ENSMUST00000121278 794 ntBASIC8.26□□□□□ -1.09
Ccdc87Q8CDL9 Gm17188-202ENSMUST00000165178 680 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc87Q8CDL9 Krr1-204ENSMUST00000174653 972 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Ccdc87Q8CDL9 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms