Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm18972-201ENSMUST00000218873 630 ntBASIC10.18□□□□□ -0.78
Sf3b2Q3UJB0 CT010453.2-201ENSMUST00000227005 483 ntBASIC10.18□□□□□ -0.78
Sf3b2Q3UJB0 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Sf3b2Q3UJB0 Gm37039-201ENSMUST00000193733 2485 ntBASIC10.18□□□□□ -0.78
Sf3b2Q3UJB0 Gm44249-201ENSMUST00000204538 1805 ntBASIC10.18□□□□□ -0.78
Sf3b2Q3UJB0 Zmym5-203ENSMUST00000173954 5357 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b2Q3UJB0 Gm12758-201ENSMUST00000127010 4175 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b2Q3UJB0 Tmem18-201ENSMUST00000057151 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b2Q3UJB0 Ctnnd1-216ENSMUST00000111690 5945 ntTSL 5 BASIC10.18□□□□□ -0.78
Sf3b2Q3UJB0 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Sf3b2Q3UJB0 Zfp946-201ENSMUST00000088763 2935 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b2Q3UJB0 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b2Q3UJB0 Gria2-202ENSMUST00000107745 4026 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
Sf3b2Q3UJB0 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC10.18□□□□□ -0.78
Sf3b2Q3UJB0 Nell2-201ENSMUST00000075275 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b2Q3UJB0 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC10.18□□□□□ -0.78
Sf3b2Q3UJB0 Arpp19-209ENSMUST00000169492 3963 ntTSL 2 BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 B3gntl1-202ENSMUST00000067399 2864 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 AC155270.1-201ENSMUST00000221626 4028 ntBASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Ubap2l-208ENSMUST00000196843 3975 ntTSL 5 BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Tro-207ENSMUST00000163969 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Gpr85-203ENSMUST00000115492 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Slc2a9-205ENSMUST00000129099 3462 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Igkv3-4-201ENSMUST00000103401 360 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Gm23437-201ENSMUST00000104036 127 ntBASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Gm14863-201ENSMUST00000119648 307 ntBASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Gm24383-201ENSMUST00000122691 333 ntBASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Gm16357-201ENSMUST00000144091 474 ntBASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Gm22533-201ENSMUST00000158821 274 ntBASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Gm25164-201ENSMUST00000158908 116 ntBASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Gm24812-201ENSMUST00000175315 284 ntBASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Gm38200-201ENSMUST00000192083 2111 ntBASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Gm24826-202ENSMUST00000197298 216 ntBASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Trav22-201ENSMUST00000198117 346 ntBASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Gm18655-201ENSMUST00000214802 1090 ntBASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Ambra1-201ENSMUST00000045699 4690 ntTSL 5 BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Gm26264-201ENSMUST00000083278 159 ntBASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Slco1c1-206ENSMUST00000205214 2515 ntTSL 5 BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Smc2-201ENSMUST00000102915 5404 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Gm37426-201ENSMUST00000195241 2470 ntBASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Gm44228-201ENSMUST00000204888 2026 ntBASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Dennd6a-205ENSMUST00000224378 2424 ntBASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 CT009518.1-201ENSMUST00000224886 1571 ntBASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Nqo1-201ENSMUST00000003947 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Phc1-201ENSMUST00000079560 3839 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Tigar-201ENSMUST00000039913 3651 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b2Q3UJB0 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 Itgam-201ENSMUST00000064821 4682 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 Eri2-207ENSMUST00000150844 3564 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 1300002E11Rik-201ENSMUST00000180830 3557 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 4930543E12Rik-202ENSMUST00000210408 1429 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 Ccr6-201ENSMUST00000097418 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 Ccrl2-201ENSMUST00000111888 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 Trim43a-201ENSMUST00000164661 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 Dock9-206ENSMUST00000212181 7368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 Gm12983-201ENSMUST00000120974 310 ntBASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 Gm24781-201ENSMUST00000157636 117 ntBASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 Gm6004-201ENSMUST00000173237 1116 ntBASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 Gm7436-201ENSMUST00000187229 391 ntBASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 Ighv1-14-201ENSMUST00000194015 402 ntBASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 Gm43689-201ENSMUST00000195951 427 ntBASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 AC160338.2-201ENSMUST00000215508 281 ntTSL 5 BASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 AC125543.2-201ENSMUST00000222114 105 ntBASIC10.16□□□□□ -0.78
Sf3b2Q3UJB0 CT030170.7-201ENSMUST00000223372 103 ntBASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms